RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TRAF1Q13077 416 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 NSMFQ6X4W1 530 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 RNF26Q9BY78 433 aaPredicted RBP20.16■□□□□ 0.82
NXF1-216ENST00000533499 MROH8Q9H579 483 aa20.16■□□□□ 0.82
NXF1-216ENST00000533499 RBM27Q9P2N5 1060 aaKnown RBP20.16■□□□□ 0.82
NXF1-216ENST00000533499 ORC3Q9UBD5 711 aaPredicted RBP20.16■□□□□ 0.82
NXF1-216ENST00000533499 CASP8AP2Q9UKL3 1982 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 K7ELQ4 463 aaPredicted RBP20.15■□□□□ 0.82
NXF1-216ENST00000533499 CTDNEP1O95476 244 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 KCTD2Q14681 263 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 TKFCQ3LXA3 575 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 MUM1L1Q5H9M0 696 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 PLEKHH3Q7Z736 793 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 SHCBP1Q8NEM2 672 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 MMP19Q99542 508 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 ACAD9Q9H845 621 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 FOXD4L1Q9NU39 408 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 MRPL11Q9Y3B7 192 aaKnown RBP20.15■□□□□ 0.82
NXF1-216ENST00000533499 ABCB11O95342 1321 aa20.15■□□□□ 0.82
NXF1-216ENST00000533499 ZSWIM8A7E2V4 1837 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 DEXIO95424 95 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 HSP90AA1P07900 732 aaKnown RBP20.14■□□□□ 0.81
NXF1-216ENST00000533499 SCG2P13521 617 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 NAPAP54920 295 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 ARHGEF6Q15052 776 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 GPR142Q7Z601 462 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 ANKRD35Q8N283 1001 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 NSUN7Q8NE18 718 aaKnown RBP20.14■□□□□ 0.81
NXF1-216ENST00000533499 CHST13Q8NET6 341 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 SNX21Q969T3 373 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 FBXO40Q9UH90 709 aa20.14■□□□□ 0.81
NXF1-216ENST00000533499 FCER1AP12319 257 aa20.13■□□□□ 0.81
NXF1-216ENST00000533499 CTGFP29279 349 aa20.13■□□□□ 0.81
NXF1-216ENST00000533499 PFKFB3Q16875 520 aaPredicted RBP20.13■□□□□ 0.81
NXF1-216ENST00000533499 WWC2Q6AWC2 1192 aa20.13■□□□□ 0.81
NXF1-216ENST00000533499 FAM184AQ8NB25 1140 aa20.13■□□□□ 0.81
NXF1-216ENST00000533499 TRIM47Q96LD4 638 aa20.13■□□□□ 0.81
NXF1-216ENST00000533499 MGAMO43451 1857 aa20.13■□□□□ 0.81
NXF1-216ENST00000533499 NFIBO00712 420 aa20.12■□□□□ 0.81
NXF1-216ENST00000533499 AIFM3Q96NN9 605 aa20.12■□□□□ 0.81
NXF1-216ENST00000533499 LLPHQ9BRT6 129 aaKnown RBP20.12■□□□□ 0.81
NXF1-216ENST00000533499 TRIM17Q9Y577 477 aa20.12■□□□□ 0.81
NXF1-216ENST00000533499 CFBP00751 764 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 CALML3P27482 149 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 PKN1Q16512 942 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 NOM1Q5C9Z4 860 aaKnown RBP20.11■□□□□ 0.81
NXF1-216ENST00000533499 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 WASF1Q92558 559 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 ALG1Q9BT22 464 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 VPS54Q9P1Q0 977 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 SMC3Q9UQE7 1217 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
NXF1-216ENST00000533499 PLXNB2O15031 1838 aa20.11■□□□□ 0.81
NXF1-216ENST00000533499 PCNTO95613 3336 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 DOCK3Q8IZD9 2030 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 STK36Q9NRP7 1315 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 PGK2P07205 417 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 PTPREP23469 700 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 HOXD10P28358 340 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 BECN1Q14457 450 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 RNF207Q6ZRF8 634 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 DPP9Q86TI2 863 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 MCF2L2Q86YR7 1114 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 CLEC4DQ8WXI8 215 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 TBC1D5Q92609 795 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 NUDT12Q9BQG2 462 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 A1CFQ9NQ94 594 aaKnown RBP20.1■□□□□ 0.81
NXF1-216ENST00000533499 BARHL2Q9NY43 387 aa20.1■□□□□ 0.81
NXF1-216ENST00000533499 SLC15A5A6NIM6 579 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 STXBP3O00186 592 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 STRNO43815 780 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 FDPSP14324 419 aaKnown RBP20.09■□□□□ 0.81
NXF1-216ENST00000533499 CYP2B6P20813 491 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 ADORA2AP29274 412 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 NLRP5P59047 1200 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 HMGN5P82970 282 aaKnown RBP20.09■□□□□ 0.81
NXF1-216ENST00000533499 CAP1Q01518 475 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 BAATQ14032 418 aaPredicted RBP20.09■□□□□ 0.81
NXF1-216ENST00000533499 CCDC12Q8WUD4 166 aaPredicted RBP20.09■□□□□ 0.81
NXF1-216ENST00000533499 CUL5Q93034 780 aa20.09■□□□□ 0.81
NXF1-216ENST00000533499 ZNFX1Q9P2E3 1918 aaKnown RBP20.08■□□□□ 0.81
NXF1-216ENST00000533499 SMCO2A6NFE2 343 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 POTEB2H3BUK9 544 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 hCG_1984214I3L0E3 225 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 XBP1P17861 261 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 HOXA13P31271 388 aaPredicted RBP20.08■□□□□ 0.81
NXF1-216ENST00000533499 ANP32AP39687 249 aaKnown RBP20.08■□□□□ 0.81
NXF1-216ENST00000533499 ADCY7P51828 1080 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 PRKCZQ05513 592 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 TRIM29Q14134 588 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 TYW1BQ6NUM6 668 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 SLC30A10Q6XR72 485 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 ZNF713Q8N859 430 aaPredicted RBP20.08■□□□□ 0.81
NXF1-216ENST00000533499 CCDC148Q8NFR7 591 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 SMARCC2Q8TAQ2 1214 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 PSTPIP2Q9H939 334 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 GABRQQ9UN88 632 aa20.08■□□□□ 0.81
NXF1-216ENST00000533499 PFASO15067 1338 aa20.07■□□□□ 0.8
NXF1-216ENST00000533499 GCOM1H8Y6P7 765 aaPredicted RBP20.07■□□□□ 0.8
NXF1-216ENST00000533499 POLR2MP0CAP2 368 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms