RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 USP17L3A6NCW0 530 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 USP17L4A6NCW7 530 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 OAS2P29728 719 aaKnown RBP19.35■□□□□ 0.69
PHRF1-205ENST00000533464 USP17L1Q7RTZ2 530 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 MED14O60244 1454 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 SLC8A3P57103 927 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 PPARDQ03181 441 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 PABPC4Q13310 644 aaKnown RBP eCLIP19.35■□□□□ 0.69
PHRF1-205ENST00000533464 AMFRQ9UKV5 643 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 FAM169AQ9Y6X4 670 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 USP31Q70CQ4 1352 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 K7ENM7 598 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 TBC1D10CQ8IV04 446 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 DEPTORQ8TB45 409 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 COA7Q96BR5 231 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 MRRFQ96E11 262 aaKnown RBP19.35■□□□□ 0.69
PHRF1-205ENST00000533464 TEKT3Q9BXF9 490 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 METTL14Q9HCE5 456 aaKnown RBP19.35■□□□□ 0.69
PHRF1-205ENST00000533464 KCNG1Q9UIX4 513 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 ADGRB3O60242 1522 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 RABEP2Q9H5N1 569 aa19.35■□□□□ 0.69
PHRF1-205ENST00000533464 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.35■□□□□ 0.698e-7■■■□□ 17.4
PHRF1-205ENST00000533464 BRD3Q15059 726 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 RUFY4Q6ZNE9 571 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 SMAP1Q8IYB5 467 aaPredicted RBP19.34■□□□□ 0.69
PHRF1-205ENST00000533464 EPSTI1Q96J88 318 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 PPP1R13BQ96KQ4 1090 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 KANSL2Q9H9L4 492 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 EFCAB8A8MWE9 144 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 MAP3K9P80192 1104 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 PTPROQ16827 1216 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 AS3MTQ9HBK9 375 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 CCPG1Q9ULG6 757 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 RABGAP1Q9Y3P9 1069 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 HYOU1Q9Y4L1 999 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 KCNK3O14649 394 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 CA8P35219 290 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 GRAPQ13588 217 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 BRDTQ58F21 947 aaPredicted RBP19.34■□□□□ 0.69
PHRF1-205ENST00000533464 GOLGA5Q8TBA6 731 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 GRAPLQ8TC17 118 aaPredicted RBP19.34■□□□□ 0.69
PHRF1-205ENST00000533464 TRIM6Q9C030 488 aaPredicted RBP19.34■□□□□ 0.69
PHRF1-205ENST00000533464 ABCA6Q8N139 1617 aa19.34■□□□□ 0.69
PHRF1-205ENST00000533464 DHTKD1Q96HY7 919 aaPredicted RBP19.33■□□□□ 0.69
PHRF1-205ENST00000533464 SAMSN1Q9NSI8 373 aaKnown RBP19.33■□□□□ 0.69
PHRF1-205ENST00000533464 ATP5DP30049 168 aa19.33■□□□□ 0.69
PHRF1-205ENST00000533464 MCF2L2Q86YR7 1114 aa19.33■□□□□ 0.69
PHRF1-205ENST00000533464 C10orf67Q8IYJ2 551 aa19.33■□□□□ 0.69
PHRF1-205ENST00000533464 SERPINA10Q9UK55 444 aa19.33■□□□□ 0.69
PHRF1-205ENST00000533464 GDF11O95390 407 aa19.33■□□□□ 0.68
PHRF1-205ENST00000533464 PLEKHA8P1O95397 391 aa19.33■□□□□ 0.68
PHRF1-205ENST00000533464 EEF1GP26641 437 aaKnown RBP19.33■□□□□ 0.68
PHRF1-205ENST00000533464 GABPB1Q06547 395 aaPredicted RBP19.33■□□□□ 0.68
PHRF1-205ENST00000533464 ENOX1Q8TC92 643 aaKnown RBP19.33■□□□□ 0.68
PHRF1-205ENST00000533464 P2RX5Q93086 422 aa19.33■□□□□ 0.68
PHRF1-205ENST00000533464 GPR101Q96P66 508 aaPredicted RBP19.33■□□□□ 0.68
PHRF1-205ENST00000533464 FAM204AQ9H8W3 233 aa19.33■□□□□ 0.68
PHRF1-205ENST00000533464 LONRF2Q1L5Z9 754 aa19.33■□□□□ 0.68
PHRF1-205ENST00000533464 DCAF15Q66K64 600 aa19.33■□□□□ 0.68
PHRF1-205ENST00000533464 ARL1P40616 181 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-205ENST00000533464 LRRC41Q15345 812 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 KRT26Q7Z3Y9 468 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 UBE2Q2Q8WVN8 375 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 CCDC127Q96BQ5 260 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 PAGR1Q9BTK6 254 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 RBL2Q08999 1139 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 ODR4Q5SWX8 454 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 ZNF658Q5TYW1 1059 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-205ENST00000533464 CSADQ9Y600 493 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 ABCC12Q96J65 1359 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 SORBS3O60504 671 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 UBXN2AP68543 259 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 PPFIA1Q13136 1202 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 TCP1P17987 556 aaKnown RBP19.32■□□□□ 0.68
PHRF1-205ENST00000533464 SETDB1Q15047 1291 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 LRCH2Q5VUJ6 765 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 BRIP1Q9BX63 1249 aa19.32■□□□□ 0.68
PHRF1-205ENST00000533464 SETD1BQ9UPS6 1966 aaKnown RBP19.32■□□□□ 0.68
PHRF1-205ENST00000533464 TULP4Q9NRJ4 1543 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 H2AFZP0C0S5 128 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 H2AFVQ71UI9 128 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 SMC6Q96SB8 1091 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 ISCA1Q9BUE6 129 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 CDC42BPBQ9Y5S2 1711 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 NBPF26B4DH59 902 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 E7EVH7 732 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 PRDX5P30044 214 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 EXOC3L4Q17RC7 722 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 CC2D2BQ6DHV5 1058 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 NBPF10Q6P3W6 841 aaKnown RBP19.31■□□□□ 0.68
PHRF1-205ENST00000533464 NBPF15Q8N660 670 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 STAG1Q8WVM7 1258 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 PABPN1LA6NDY0 278 aaKnown RBP19.31■□□□□ 0.68
PHRF1-205ENST00000533464 MLXIPQ9HAP2 919 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
PHRF1-205ENST00000533464 ARMCX5Q6P1M9 558 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 CEP128Q6ZU80 1094 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 DGKHQ86XP1 1220 aa19.31■□□□□ 0.68
PHRF1-205ENST00000533464 SMCR8Q8TEV9 937 aaPredicted RBP19.31■□□□□ 0.68
PHRF1-205ENST00000533464 RPS6KA4O75676 772 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms