RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
CDC27-209ENST00000532893 FAM133AQ8N9E0 248 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 MKL1Q969V6 931 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 SCLYQ96I15 445 aa17.25■□□□□ 0.35
CDC27-209ENST00000532893 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
CDC27-209ENST00000532893 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
CDC27-209ENST00000532893 IGKV6D-41A0A0C4DH26 115 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 ASB14A6NK59 587 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 RFXAPO00287 272 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 ZEB2O60315 1214 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 HMMRO75330 724 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 PRDM1O75626 825 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 ATP2A2P16615 1042 aaKnown RBP17.24■□□□□ 0.35
CDC27-209ENST00000532893 SMPD1P17405 629 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 OAZ1P54368 228 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 AAK1Q2M2I8 961 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
CDC27-209ENST00000532893 VWCEQ96DN2 955 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 ACAD9Q9H845 621 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 MTMR4Q9NYA4 1195 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 COG6Q9Y2V7 657 aa17.24■□□□□ 0.35
CDC27-209ENST00000532893 TMEM232C9JQI7 657 aa17.23■□□□□ 0.35
CDC27-209ENST00000532893 LRRC47Q8N1G4 583 aaKnown RBP17.23■□□□□ 0.35
CDC27-209ENST00000532893 CEP95Q96GE4 821 aa17.23■□□□□ 0.35
CDC27-209ENST00000532893 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
CDC27-209ENST00000532893 SEZ6LQ9BYH1 1024 aa17.23■□□□□ 0.35
CDC27-209ENST00000532893 A1CFQ9NQ94 594 aaKnown RBP17.23■□□□□ 0.35
CDC27-209ENST00000532893 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
CDC27-209ENST00000532893 ERC2O15083 957 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 BMP3P12645 472 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 TMEM67Q5HYA8 995 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 TMEM63BQ5T3F8 832 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 SLFN13Q68D06 897 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 IQSEC1Q6DN90 963 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 GIMAP6Q6P9H5 292 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 EEPD1Q7L9B9 569 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 CERS4Q9HA82 394 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 RNF146Q9NTX7 359 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 MTCH2Q9Y6C9 303 aa17.22■□□□□ 0.35
CDC27-209ENST00000532893 GBF1Q92538 1859 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 TTLL1O95922 423 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 FDX1P10109 184 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 TAPT1Q6NXT6 567 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 DEFB128Q7Z7B8 93 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 GMCL1P1Q8NEA9 526 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 OSBP2Q969R2 916 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 TRERF1Q96PN7 1200 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 ALDH8A1Q9H2A2 487 aaPredicted RBP17.21■□□□□ 0.35
CDC27-209ENST00000532893 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
CDC27-209ENST00000532893 GREB1LQ9C091 1923 aaPredicted RBP17.2■□□□□ 0.34
CDC27-209ENST00000532893 TRANK1O15050 2925 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 GTPBP6O43824 516 aaPredicted RBP17.2■□□□□ 0.34
CDC27-209ENST00000532893 CA3P07451 260 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 CYP2C9P11712 490 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 ALAS1P13196 640 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
CDC27-209ENST00000532893 KRT40Q6A162 431 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 FBXO16Q8IX29 292 aaPredicted RBP17.2■□□□□ 0.34
CDC27-209ENST00000532893 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 LRFN3Q9BTN0 628 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 TRMT13Q9NUP7 481 aaKnown RBP17.2■□□□□ 0.34
CDC27-209ENST00000532893 Q9Y3F1 56 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 ZNF536O15090 1300 aa17.2■□□□□ 0.34
CDC27-209ENST00000532893 EPOPA6NHQ4 379 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 APPP05067 770 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 POU3F3P20264 500 aaPredicted RBP17.19■□□□□ 0.34
CDC27-209ENST00000532893 STAT2P52630 851 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 SNAP25P60880 206 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 TKFCQ3LXA3 575 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 KIAA1211Q6ZU35 1233 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 STAG1Q8WVM7 1258 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
CDC27-209ENST00000532893 ZBTB40Q9NUA8 1239 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 SYNPO2Q9UMS6 1093 aa17.19■□□□□ 0.34
CDC27-209ENST00000532893 SUPT20HL2P0C7V6 817 aa17.18■□□□□ 0.34
CDC27-209ENST00000532893 MCCP23508 829 aa17.18■□□□□ 0.34
CDC27-209ENST00000532893 TDO2P48775 406 aa17.18■□□□□ 0.34
CDC27-209ENST00000532893 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
CDC27-209ENST00000532893 FAM160B2Q86V87 743 aa17.18■□□□□ 0.34
CDC27-209ENST00000532893 PURBQ96QR8 312 aaKnown RBP17.18■□□□□ 0.34
CDC27-209ENST00000532893 TLL1O43897 1013 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 SMARCA5O60264 1052 aaPredicted RBP17.17■□□□□ 0.34
CDC27-209ENST00000532893 PFKMP08237 780 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 TSPY3P0CV98 308 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 TSPY8P0CW00 308 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 SLC1A4P43007 532 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 NSMFQ6X4W1 530 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 NEDD1Q8NHV4 660 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 ARNTL2Q8WYA1 636 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 CYP39A1Q9NYL5 469 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 COG5Q9UP83 839 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 TNKSO95271 1327 aa17.17■□□□□ 0.34
CDC27-209ENST00000532893 MYH4Q9Y623 1939 aa17.16■□□□□ 0.34
CDC27-209ENST00000532893 RNF113AO15541 343 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms