RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 REPS2Q8NFH8 660 aa13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 CUL5Q93034 780 aa13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 ATG4CQ96DT6 458 aa13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 CTDP1Q9Y5B0 961 aaPredicted RBP13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 TLL2Q9Y6L7 1015 aa13.77□□□□□ -0.21
UBASH3B-207ENST00000530917 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 ADAMTS3O15072 1205 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 OSBPP22059 807 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 MCM4P33991 863 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 USH1GQ495M9 461 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 RGMBQ6NW40 437 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 LBX2Q6XYB7 198 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 CHAMP1Q96JM3 812 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 PCDHA6Q9UN73 950 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 SLC45A1Q9Y2W3 748 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 PCDHA8Q9Y5H6 950 aa13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
UBASH3B-207ENST00000530917 TMEM88BA6NKF7 163 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 CLK2P49760 499 aaKnown RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 ZNF157P51786 506 aaPredicted RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 IRX3P78415 501 aaPredicted RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 NFKBIBQ15653 356 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 RILPL1Q5EBL4 403 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 MCTP2Q6DN12 878 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 KRT25Q7Z3Z0 450 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 MB21D1Q8N884 522 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 HHIPL1Q96JK4 782 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 AGBL1Q96MI9 1066 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 P2RX7Q99572 595 aaKnown RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 SCAND2PQ9GZW5 306 aaPredicted RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 ASCC2Q9H1I8 757 aaPredicted RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 RAVER2Q9HCJ3 691 aaKnown RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 RTEL1Q9NZ71 1219 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 TFIP11Q9UBB9 837 aaKnown RBP13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 CCPG1Q9ULG6 757 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 CNPY2Q9Y2B0 182 aa13.75□□□□□ -0.21
UBASH3B-207ENST00000530917 CCL15-CCL14A0A0B4J2E2 113 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 CCDC194A0A1B0GVG4 234 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 TESPA1A2RU30 521 aaPredicted RBP13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 GOLGA6L22H0YM25 854 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 PIK3CDO00329 1044 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 OPLAHO14841 1288 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 NCLP19338 710 aaKnown RBP13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 TOB1P50616 345 aaPredicted RBP13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 CCL15Q16663 113 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 EARS2Q5JPH6 523 aaKnown RBP13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 ANKRD23Q86SG2 305 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 SAMD3Q8N6K7 520 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 RASGRP4Q8TDF6 673 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
UBASH3B-207ENST00000530917 MANSC4A6NHS7 340 aaPredicted RBP13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 BTBD19C9JJ37 291 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 MEIS2O14770 477 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 HERVK_113P62684 666 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 TKFCQ3LXA3 575 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 ANO1Q5XXA6 986 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 CCDC102AQ96A19 550 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 MAF1Q9H063 256 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 POLR3EQ9NVU0 708 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 PNMA3Q9UL41 463 aa13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 ZNF214Q9UL59 606 aaPredicted RBP13.73□□□□□ -0.21
UBASH3B-207ENST00000530917 ELP1O95163 1332 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 FAM205CA6NFA0 338 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 DDX11L8A8MPP1 907 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 FOXN1O15353 648 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 YEATS4O95619 227 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 FOSP01100 380 aaPredicted RBP13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 SLC10A3P09131 477 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 ALAS1P13196 640 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 PTMSP20962 102 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 STAT3P40763 770 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 NASPP49321 788 aaPredicted RBP13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 GHRHRQ02643 423 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 NONOQ15233 471 aaKnown RBP eCLIP13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 USP17L6PQ6QN14 398 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 POTEEQ6S8J3 1075 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 MCF2L2Q86YR7 1114 aa13.72□□□□□ -0.21
UBASH3B-207ENST00000530917 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms