RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 GUCD1Q96NT3 240 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 MAP3K14Q99558 947 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 MOV10L1Q9BXT6 1211 aaKnown RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 IL25Q9H293 177 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 SLKQ9H2G2 1235 aaPredicted RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 RPAP3Q9H6T3 665 aaPredicted RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 MTMR4Q9NYA4 1195 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 CLIP2Q9UDT6 1046 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 SEC63Q9UGP8 760 aaKnown RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 ADAMTS5Q9UNA0 930 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 LIMCH1Q9UPQ0 1083 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.56□□□□□ -1.52
SSBP3-213ENST00000530618 BRWD1Q9NSI6 2320 aa5.56□□□□□ -1.52
SSBP3-213ENST00000530618 KLF18A0A0U1RQI7 1052 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 GOLGA8AA7E2F4 631 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 SH2B2O14492 632 aaPredicted RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 WDR46O15213 610 aaKnown RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 FOXP2O15409 715 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 COPB2P35606 906 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 STAT2P52630 851 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 TRIM29Q14134 588 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 RTN1Q16799 776 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 OLFML2BQ68BL8 750 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 Q6ZUG5 572 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 SGMS1Q86VZ5 419 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 MICU3Q86XE3 530 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 CCAR1Q8IX12 1150 aaKnown RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 TRMT44Q8IYL2 757 aaKnown RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 SHCBP1Q8NEM2 672 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 NUP133Q8WUM0 1156 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 BRF1Q92994 677 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 ATG4CQ96DT6 458 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 ZNF274Q96GC6 653 aaPredicted RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 GMCL1Q96IK5 515 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 FGD4Q96M96 766 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 UPF3BQ9BZI7 483 aaKnown RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 VCPKMTQ9H867 229 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 CWC22Q9HCG8 908 aaKnown RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 FBXO28Q9NVF7 368 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 DDX20Q9UHI6 824 aaKnown RBP5.55□□□□□ -1.52
SSBP3-213ENST00000530618 FEM1BQ9UK73 627 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 TMX2Q9Y320 296 aa5.55□□□□□ -1.52
SSBP3-213ENST00000530618 SCN5AQ14524 2016 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 DNM1LO00429 736 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 SEC24BO95487 1268 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 BMP3P12645 472 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 EEF2P13639 858 aaKnown RBP5.54□□□□□ -1.52
SSBP3-213ENST00000530618 PDCP20941 246 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ITGB8P26012 769 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ADORA2AP29274 412 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 RTP1P59025 263 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 HMGN5P82970 282 aaKnown RBP5.54□□□□□ -1.52
SSBP3-213ENST00000530618 MDM2Q00987 491 aaPredicted RBP5.54□□□□□ -1.52
SSBP3-213ENST00000530618 TMEM132BQ14DG7 1078 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ADCK5Q3MIX3 580 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 C9orf50Q5SZB4 431 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 SLFN13Q68D06 897 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 MAMSTRQ6ZN01 415 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 RASEFQ8IZ41 740 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ZNF654Q8IZM8 581 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 DEFB123Q8N688 67 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 MB21D1Q8N884 522 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ENAHQ8N8S7 591 aaPredicted RBP5.54□□□□□ -1.52
SSBP3-213ENST00000530618 FAM184AQ8NB25 1140 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 CCDC12Q8WUD4 166 aaPredicted RBP5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ANKS1AQ92625 1134 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 MKL1Q969V6 931 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 MAML3Q96JK9 1138 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ZKSCAN3Q9BRR0 538 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 TANGO6Q9C0B7 1094 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 SPATC1LQ9H0A9 340 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 GLT8D2Q9H1C3 349 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 LY9Q9HBG7 655 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 BRMS1Q9HCU9 246 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 PDLIM7Q9NR12 457 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 HOXC10Q9NYD6 342 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 ZNF214Q9UL59 606 aaPredicted RBP5.54□□□□□ -1.52
SSBP3-213ENST00000530618 MTMR7Q9Y216 660 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 STXBP5LQ9Y2K9 1186 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 TET1Q8NFU7 2136 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 TANC1Q9C0D5 1861 aa5.54□□□□□ -1.52
SSBP3-213ENST00000530618 SCN10AQ9Y5Y9 1956 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 IGKV6D-41A0A0C4DH26 115 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 TRIM43BA6NCK2 446 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 F5H6K3 240 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 hCG_1984214I3L0E3 225 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 K7ELQ4 463 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 SEPT4O43236 478 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ADCY6O43306 1168 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ZBED4O75132 1171 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ADAMTS4O75173 837 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 FLOT1O75955 427 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 TAL1P17542 331 aaPredicted RBP5.53□□□□□ -1.52
SSBP3-213ENST00000530618 ERCC3P19447 782 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 SMARCA1P28370 1054 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 EPHB4P54760 987 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 AK2P54819 239 aa5.53□□□□□ -1.52
SSBP3-213ENST00000530618 CCNA1P78396 465 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms