RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ERFEQ4G0M1 354 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 ZMYM1Q5SVZ6 1142 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 ZBTB8OSQ8IWT0 167 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 ANKRD35Q8N283 1001 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 MAP4K1Q92918 833 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 PCDHA1Q9Y5I3 950 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 TXNDC9O14530 226 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 PPEF1O14829 653 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-220ENST00000529526 CASP14P31944 242 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 POLGP54098 1239 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-220ENST00000529526 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 PTPN22Q9Y2R2 807 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 INSRP06213 1382 aa8.92□□□□□ -0.98
CTNND1-220ENST00000529526 LOC102724428A0A0B4J2F2 783 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 ENC1O14682 589 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 FMNL1O95466 1100 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 LONP1P36776 959 aaKnown RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 SLC12A2P55011 1212 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 SIK1P57059 783 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 ITKQ08881 620 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 FAM182BQ5T319 152 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 IQCDQ96DY2 449 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 RABGAP1Q9Y3P9 1069 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 CYP21A2P08686 494 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 GAS2L3Q86XJ1 694 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 GABPB2Q8TAK5 448 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 ZFYVE16Q7Z3T8 1539 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 CNGA1P29973 690 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 MYL7Q01449 175 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 UBE3CQ15386 1083 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 FAM26FQ5R3K3 315 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 TMCO4Q5TGY1 634 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 C11orf57Q6ZUT1 292 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 CROCCP2Q86T23 111 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 PPP1R13BQ96KQ4 1090 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 IWS1Q96ST2 819 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 APOL6Q9BWW8 343 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 ZNF215Q9UL58 517 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 PCDHA4Q9UN74 947 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 CAPN9O14815 690 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 GDF11O95390 407 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 RBM6P78332 1123 aaKnown RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 PABPC4Q13310 644 aaKnown RBP eCLIP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 LMNTD2Q8IXW0 634 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 TRIML1Q8N9V2 468 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 ZBTB1Q9Y2K1 713 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 SAT1P21673 171 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
CTNND1-220ENST00000529526 RBL2Q08999 1139 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 TNFAIP1Q13829 316 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 LCORLQ8N3X6 602 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 COL4A3BPQ9Y5P4 624 aa8.91□□□□□ -0.98
CTNND1-220ENST00000529526 SOS2Q07890 1332 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-220ENST00000529526 BRD3Q15059 726 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 NXNQ6DKJ4 435 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 SRGAP1Q7Z6B7 1085 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 MCF2L2Q86YR7 1114 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 POMGNT1Q8WZA1 660 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 YEATS2Q9ULM3 1422 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 METP08581 1390 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 MEIS1O00470 390 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 CIAO1O76071 339 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 ARHGAP25P42331 645 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 EHHADHQ08426 723 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 GALNT17Q6IS24 598 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 ARHGAP27Q6ZUM4 889 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.9□□□□□ -0.98
CTNND1-220ENST00000529526 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 PUS7LQ9H0K6 701 aaKnown RBP8.9□□□□□ -0.98
CTNND1-220ENST00000529526 VCX3BQ9H321 246 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 COPRSQ9NQ92 184 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 THAP12O43422 761 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 GABPB1Q06547 395 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-220ENST00000529526 HADHQ16836 314 aaKnown RBP8.9□□□□□ -0.98
CTNND1-220ENST00000529526 DPCR1Q3MIW9 517 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 ODR4Q5SWX8 454 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 ANKRD20A3Q5VUR7 823 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 NSUN7Q8NE18 718 aaKnown RBP8.9□□□□□ -0.98
CTNND1-220ENST00000529526 FBXO18Q8NFZ0 1043 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 GOLGA5Q8TBA6 731 aa8.9□□□□□ -0.98
CTNND1-220ENST00000529526 TACO1Q9BSH4 297 aaKnown RBP8.9□□□□□ -0.98
CTNND1-220ENST00000529526 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.99
CTNND1-220ENST00000529526 TMEM191BP0C7N4 346 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 EXOC3L4Q17RC7 722 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 LRCH2Q5VUJ6 765 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 TTBK2Q6IQ55 1244 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 APOA5Q6Q788 366 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 CCDC170Q8IYT3 715 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 NME8Q8N427 588 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 P3H4Q92791 437 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 TUBGCP2Q9BSJ2 902 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 DBNDD1Q9H9R9 158 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 RIC8AQ9NPQ8 531 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 STAP2Q9UGK3 403 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 BAIAP2L1Q9UHR4 511 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 PCDHA5Q9Y5H7 936 aa8.9□□□□□ -0.99
CTNND1-220ENST00000529526 EPN1Q9Y6I3 576 aaPredicted RBP8.9□□□□□ -0.99
CTNND1-220ENST00000529526 CYP2D7A0A087X1C5 515 aa8.89□□□□□ -0.99
CTNND1-220ENST00000529526 SEC31AO94979 1220 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms