RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 PTGDRQ13258 359 aa26.4■■□□□ 1.82
LTBP3-212ENST00000529189 LONRF3Q496Y0 759 aa26.4■■□□□ 1.82
LTBP3-212ENST00000529189 SPICE1Q8N0Z3 855 aa26.4■■□□□ 1.82
LTBP3-212ENST00000529189 RASGRP4Q8TDF6 673 aa26.4■■□□□ 1.82
LTBP3-212ENST00000529189 NUP88Q99567 741 aaPredicted RBP26.4■■□□□ 1.82
LTBP3-212ENST00000529189 SH2D4AQ9H788 454 aa26.4■■□□□ 1.82
LTBP3-212ENST00000529189 PTMAP06454 111 aaKnown RBP26.39■■□□□ 1.82
LTBP3-212ENST00000529189 KIAA1755Q5JYT7 1200 aa26.39■■□□□ 1.82
LTBP3-212ENST00000529189 NOL9Q5SY16 702 aaKnown RBP26.39■■□□□ 1.82
LTBP3-212ENST00000529189 FEZ1Q99689 392 aa26.39■■□□□ 1.82
LTBP3-212ENST00000529189 GOPCQ9HD26 462 aa26.39■■□□□ 1.82
LTBP3-212ENST00000529189 C6orf50Q9HD87 102 aa26.39■■□□□ 1.82
LTBP3-212ENST00000529189 HOOK1Q9UJC3 728 aaKnown RBP26.39■■□□□ 1.82
LTBP3-212ENST00000529189 A0A087WWV3 80 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 PTPRAP18433 802 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 NLRP12P59046 1061 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 FMR1Q06787 632 aaKnown RBP eCLIP26.38■■□□□ 1.81
LTBP3-212ENST00000529189 VGLL4Q14135 290 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 GPATCH4Q5T3I0 446 aaKnown RBP26.38■■□□□ 1.81
LTBP3-212ENST00000529189 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.38■■□□□ 1.81
LTBP3-212ENST00000529189 MOB2Q70IA6 237 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 GMCL1Q96IK5 515 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 TUBE1Q9UJT0 475 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 GOLGA6L19H0YKK7 550 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 GNA11P29992 359 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 MCM7P33993 719 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 IREB2P48200 963 aaKnown RBP26.38■■□□□ 1.81
LTBP3-212ENST00000529189 MAP3K9P80192 1104 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 TTLL12Q14166 644 aaPredicted RBP26.38■■□□□ 1.81
LTBP3-212ENST00000529189 TTBK2Q6IQ55 1244 aa26.38■■□□□ 1.81
LTBP3-212ENST00000529189 POLR2DO15514 142 aaKnown RBP26.37■■□□□ 1.81
LTBP3-212ENST00000529189 VCPKMTQ9H867 229 aa26.37■■□□□ 1.81
LTBP3-212ENST00000529189 PHIPQ8WWQ0 1821 aa26.37■■□□□ 1.81
LTBP3-212ENST00000529189 ESYT2A0FGR8 921 aa26.37■■□□□ 1.81
LTBP3-212ENST00000529189 SMCO2A6NFE2 343 aa26.37■■□□□ 1.81
LTBP3-212ENST00000529189 PNOCQ13519 176 aa26.37■■□□□ 1.81
LTBP3-212ENST00000529189 SNCAIPQ9Y6H5 919 aa26.37■■□□□ 1.81
LTBP3-212ENST00000529189 KRT25Q7Z3Z0 450 aa26.36■■□□□ 1.81
LTBP3-212ENST00000529189 ZNF408Q9H9D4 720 aa26.36■■□□□ 1.81
LTBP3-212ENST00000529189 BECN2A8MW95 431 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 BIN1O00499 593 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 SLC16A2P36021 539 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 DPCR1Q3MIW9 517 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 USP49Q70CQ1 688 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 CSADQ9Y600 493 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 ZHX2Q9Y6X8 837 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 BMP3P12645 472 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 SPP2Q13103 211 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 MTMR2Q13614 643 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 KANK3Q6NY19 840 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 BPIFA3Q9BQP9 254 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 WDR18Q9BV38 432 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 KIAA1683Q9H0B3 1180 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 AS3MTQ9HBK9 375 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 SERTAD1Q9UHV2 236 aa26.35■■□□□ 1.81
LTBP3-212ENST00000529189 VWA3AA6NCI4 1184 aa26.34■■□□□ 1.81
LTBP3-212ENST00000529189 DGKZQ13574 1117 aa26.34■■□□□ 1.81
LTBP3-212ENST00000529189 INF2Q27J81 1249 aa26.34■■□□□ 1.81
LTBP3-212ENST00000529189 ARL6IP4Q66PJ3 421 aaKnown RBP26.34■■□□□ 1.81
LTBP3-212ENST00000529189 DHX40Q8IX18 779 aaKnown RBP26.34■■□□□ 1.81
LTBP3-212ENST00000529189 ADGRF4Q8IZF3 695 aa26.34■■□□□ 1.81
LTBP3-212ENST00000529189 SYMPKQ92797 1274 aaKnown RBP26.34■■□□□ 1.81
LTBP3-212ENST00000529189 JMJD4Q9H9V9 463 aa26.34■■□□□ 1.81
LTBP3-212ENST00000529189 FAM83BQ5T0W9 1011 aa26.33■■□□□ 1.81
LTBP3-212ENST00000529189 PDILTQ8N807 584 aa26.33■■□□□ 1.81
LTBP3-212ENST00000529189 ZNF280CQ8ND82 737 aa26.33■■□□□ 1.81
LTBP3-212ENST00000529189 EPSTI1Q96J88 318 aa26.33■■□□□ 1.81
LTBP3-212ENST00000529189 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.33■■□□□ 1.81
LTBP3-212ENST00000529189 PNMA6FA0A0J9YX94 578 aa26.33■■□□□ 1.8
LTBP3-212ENST00000529189 ACTN4O43707 911 aaKnown RBP26.33■■□□□ 1.8
LTBP3-212ENST00000529189 MDM2Q00987 491 aaPredicted RBP26.33■■□□□ 1.8
LTBP3-212ENST00000529189 C4orf32Q8N8J7 132 aa26.33■■□□□ 1.8
LTBP3-212ENST00000529189 CLMNQ96JQ2 1002 aa26.33■■□□□ 1.8
LTBP3-212ENST00000529189 ZKSCAN5Q9Y2L8 839 aa26.33■■□□□ 1.8
LTBP3-212ENST00000529189 USP17L10C9JJH3 530 aa26.32■■□□□ 1.8
LTBP3-212ENST00000529189 POSTNQ15063 836 aa26.32■■□□□ 1.8
LTBP3-212ENST00000529189 NONOQ15233 471 aaKnown RBP eCLIP26.32■■□□□ 1.8
LTBP3-212ENST00000529189 PPP1R18Q6NYC8 613 aa26.32■■□□□ 1.8
LTBP3-212ENST00000529189 ARMC9Q7Z3E5 817 aa26.32■■□□□ 1.8
LTBP3-212ENST00000529189 AOPEPQ8N6M6 819 aa26.32■■□□□ 1.8
LTBP3-212ENST00000529189 CCDC34Q96HJ3 373 aa26.32■■□□□ 1.8
LTBP3-212ENST00000529189 TMEM232C9JQI7 657 aa26.31■■□□□ 1.8
LTBP3-212ENST00000529189 MSNP26038 577 aaKnown RBP26.31■■□□□ 1.8
LTBP3-212ENST00000529189 ANKRD13AQ8IZ07 590 aa26.31■■□□□ 1.8
LTBP3-212ENST00000529189 ELP3Q9H9T3 547 aa26.31■■□□□ 1.8
LTBP3-212ENST00000529189 IKQ13123 557 aaPredicted RBP26.31■■□□□ 1.8
LTBP3-212ENST00000529189 REXO1Q8N1G1 1221 aaKnown RBP26.31■■□□□ 1.8
LTBP3-212ENST00000529189 CNKSR2Q8WXI2 1034 aa26.31■■□□□ 1.8
LTBP3-212ENST00000529189 PCDHA5Q9Y5H7 936 aa26.31■■□□□ 1.8
LTBP3-212ENST00000529189 FOXN1O15353 648 aa26.3■■□□□ 1.8
LTBP3-212ENST00000529189 ADCY7P51828 1080 aa26.3■■□□□ 1.8
LTBP3-212ENST00000529189 BACE1P56817 501 aa26.3■■□□□ 1.8
LTBP3-212ENST00000529189 SARM1Q6SZW1 724 aa26.3■■□□□ 1.8
LTBP3-212ENST00000529189 COA7Q96BR5 231 aa26.3■■□□□ 1.8
LTBP3-212ENST00000529189 TRIM5Q9C035 493 aa26.3■■□□□ 1.8
LTBP3-212ENST00000529189 LONP1P36776 959 aaKnown RBP26.29■■□□□ 1.8
LTBP3-212ENST00000529189 ZNF75DP51815 510 aa26.29■■□□□ 1.8
LTBP3-212ENST00000529189 CHADLQ6NUI6 762 aa26.29■■□□□ 1.8
LTBP3-212ENST00000529189 DHX58Q96C10 678 aa26.29■■□□□ 1.8
LTBP3-212ENST00000529189 MTMR8Q96EF0 704 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms