RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 TMEM199Q8N511 208 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 CRBNQ96SW2 442 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 SEZ6LQ9BYH1 1024 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 CYP39A1Q9NYL5 469 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 MCM3APO60318 1980 aa18.44■□□□□ 0.54
CTSB-215ENST00000528965 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.43■□□□□ 0.54
CTSB-215ENST00000528965 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.43■□□□□ 0.54
CTSB-215ENST00000528965 SOWAHBA6NEL2 793 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 FGRP09769 529 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 PCP11498 1178 aaKnown RBP18.43■□□□□ 0.54
CTSB-215ENST00000528965 NOVP48745 357 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 CDK7P50613 346 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 EPHB4P54760 987 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 MFAP1P55081 439 aaKnown RBP18.43■□□□□ 0.54
CTSB-215ENST00000528965 AAMPQ13685 434 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 RRP12Q5JTH9 1297 aaKnown RBP18.43■□□□□ 0.54
CTSB-215ENST00000528965 VTA1Q9NP79 307 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 ADD3Q9UEY8 706 aaKnown RBP18.43■□□□□ 0.54
CTSB-215ENST00000528965 LRRC37A2A6NM11 1700 aa18.43■□□□□ 0.54
CTSB-215ENST00000528965 FOSL2P15408 326 aa18.42■□□□□ 0.54
CTSB-215ENST00000528965 FSCN1Q16658 493 aaKnown RBP18.42■□□□□ 0.54
CTSB-215ENST00000528965 SYDE2Q5VT97 1194 aa18.42■□□□□ 0.54
CTSB-215ENST00000528965 PSRC1Q6PGN9 363 aaPredicted RBP18.42■□□□□ 0.54
CTSB-215ENST00000528965 FAM126BQ8IXS8 530 aa18.42■□□□□ 0.54
CTSB-215ENST00000528965 MAFAQ8NHW3 353 aaPredicted RBP18.42■□□□□ 0.54
CTSB-215ENST00000528965 RANBP17Q9H2T7 1088 aaKnown RBP18.42■□□□□ 0.54
CTSB-215ENST00000528965 INCENPQ9NQS7 918 aa18.42■□□□□ 0.54
CTSB-215ENST00000528965 TCP11L1Q9NUJ3 509 aa18.42■□□□□ 0.54
CTSB-215ENST00000528965 GNEQ9Y223 722 aaKnown RBP18.42■□□□□ 0.54
CTSB-215ENST00000528965 Q9Y3F1 56 aa18.42■□□□□ 0.54
CTSB-215ENST00000528965 LOC102724159A0A0B4J2E5 919 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 A0A0D9SFI3 127 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.41■□□□□ 0.54
CTSB-215ENST00000528965 TRIM6-TRIM34B2RNG4 842 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 FGAP02671 866 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 SNAP25P60880 206 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 BEX3Q00994 111 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 PWP2Q15269 919 aaKnown RBP18.41■□□□□ 0.54
CTSB-215ENST00000528965 MUM1L1Q5H9M0 696 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 IQSEC1Q6DN90 963 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 BTNL9Q6UXG8 535 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 RASGRP2Q7LDG7 609 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 FAM227BQ96M60 508 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 MPHOSPH6Q99547 160 aaKnown RBP18.41■□□□□ 0.54
CTSB-215ENST00000528965 TTYH1Q9H313 450 aaPredicted RBP18.41■□□□□ 0.54
CTSB-215ENST00000528965 RNF41Q9H4P4 317 aaPredicted RBP18.41■□□□□ 0.54
CTSB-215ENST00000528965 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
CTSB-215ENST00000528965 CTAGE5O15320 804 aa18.4■□□□□ 0.54
CTSB-215ENST00000528965 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
CTSB-215ENST00000528965 DNAJB2P25686 324 aa18.4■□□□□ 0.54
CTSB-215ENST00000528965 NT5C2P49902 561 aa18.4■□□□□ 0.54
CTSB-215ENST00000528965 IRX5P78411 483 aaPredicted RBP18.4■□□□□ 0.54
CTSB-215ENST00000528965 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
CTSB-215ENST00000528965 FBXO16Q8IX29 292 aaPredicted RBP18.4■□□□□ 0.54
CTSB-215ENST00000528965 MYLIPQ8WY64 445 aa18.4■□□□□ 0.54
CTSB-215ENST00000528965 TMEM47Q9BQJ4 181 aa18.4■□□□□ 0.54
CTSB-215ENST00000528965 PPP1R12CQ9BZL4 782 aa18.4■□□□□ 0.54
CTSB-215ENST00000528965 MTIF3Q9H2K0 278 aaKnown RBP18.4■□□□□ 0.54
CTSB-215ENST00000528965 DYNC1LI2O43237 492 aaPredicted RBP18.39■□□□□ 0.53
CTSB-215ENST00000528965 SMPD1P17405 629 aa18.39■□□□□ 0.53
CTSB-215ENST00000528965 NMIQ13287 307 aaPredicted RBP18.39■□□□□ 0.53
CTSB-215ENST00000528965 MFSD6Q6ZSS7 791 aa18.39■□□□□ 0.53
CTSB-215ENST00000528965 EEPD1Q7L9B9 569 aa18.39■□□□□ 0.53
CTSB-215ENST00000528965 MORC4Q8TE76 937 aa18.39■□□□□ 0.53
CTSB-215ENST00000528965 TTC14Q96N46 770 aa18.39■□□□□ 0.53
CTSB-215ENST00000528965 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.539e-8■■■■■ 55.1
CTSB-215ENST00000528965 FRMPD2Q68DX3 1309 aaPredicted RBP18.39■□□□□ 0.53
CTSB-215ENST00000528965 LAMA2P24043 3122 aaKnown RBP18.38■□□□□ 0.53
CTSB-215ENST00000528965 PTPDC1A2A3K4 754 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 CSF2RAP15509 400 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 SLC16A2P36021 539 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 ALDH5A1P51649 535 aaPredicted RBP18.38■□□□□ 0.53
CTSB-215ENST00000528965 ITGA7Q13683 1181 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 AKNAD1Q5T1N1 836 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 TTBK2Q6IQ55 1244 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 SLC43A3Q8NBI5 491 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 LNPKQ9C0E8 428 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 GPCPD1Q9NPB8 672 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 ASTN1O14525 1302 aa18.38■□□□□ 0.53
CTSB-215ENST00000528965 CD4P01730 458 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 PDHBP11177 359 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 HAND2P61296 217 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 BAATQ14032 418 aaPredicted RBP18.37■□□□□ 0.53
CTSB-215ENST00000528965 BRDTQ58F21 947 aaPredicted RBP18.37■□□□□ 0.53
CTSB-215ENST00000528965 TMEM240Q5SV17 173 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 TAPT1Q6NXT6 567 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 ZNF589Q86UQ0 364 aaPredicted RBP18.37■□□□□ 0.53
CTSB-215ENST00000528965 ESR2Q92731 530 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 TIFAQ96CG3 184 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 HIPK3Q9H422 1215 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
CTSB-215ENST00000528965 PDGFCQ9NRA1 345 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 WDR19Q8NEZ3 1342 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 RAD50Q92878 1312 aa18.37■□□□□ 0.53
CTSB-215ENST00000528965 A0A0C4DFX4 3053 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 B4DLN1 442 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 NFIBO00712 420 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 CPT1AP50416 773 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms