RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 PAK6Q9NQU5 681 aaPredicted RBP13.42□□□□□ -0.26
USF1-208ENST00000528768 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 UNC80Q8N2C7 3258 aa13.42□□□□□ -0.26
USF1-208ENST00000528768 MROH7-TTC4A0A0A0MT08 1334 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 CXCL11O14625 94 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 INHAP05111 366 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 CALML3P27482 149 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 MARCKSP29966 332 aaPredicted RBP13.41□□□□□ -0.26
USF1-208ENST00000528768 ZNF75DP51815 510 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 NLRP12P59046 1061 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 C12orf60Q5U649 245 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 RESP18Q5W5W9 173 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 FAM109BQ6ICB4 259 aaPredicted RBP13.41□□□□□ -0.26
USF1-208ENST00000528768 TMTC3Q6ZXV5 915 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 ANKS1AQ92625 1134 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 PAWRQ96IZ0 340 aaKnown RBP13.41□□□□□ -0.26
USF1-208ENST00000528768 LZTS2Q9BRK4 669 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 TCP11L1Q9NUJ3 509 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 SUGT1Q9Y2Z0 365 aa13.41□□□□□ -0.26
USF1-208ENST00000528768 TRIM75PA6NK02 468 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 NEMFO60524 1076 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 PRDM1O75626 825 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 TPM2P07951 284 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 TROAPQ12815 778 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 IQCB1Q15051 598 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 FASTKD5Q7L8L6 764 aaKnown RBP13.4□□□□□ -0.26
USF1-208ENST00000528768 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
USF1-208ENST00000528768 PYM1Q9BRP8 204 aaKnown RBP13.4□□□□□ -0.26
USF1-208ENST00000528768 DACH1Q9UI36 760 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 KCNJ14Q9UNX9 436 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 HPSEQ9Y251 543 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 SLC45A1Q9Y2W3 748 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
USF1-208ENST00000528768 ROBO3Q96MS0 1386 aa13.4□□□□□ -0.26
USF1-208ENST00000528768 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
USF1-208ENST00000528768 TSPY3P0CV98 308 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 TSPY8P0CW00 308 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 PTPREP23469 700 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 TRAPPC10P48553 1259 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 FLT3LGP49771 235 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 TFAP4Q01664 338 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 NOL9Q5SY16 702 aaKnown RBP13.39□□□□□ -0.27
USF1-208ENST00000528768 Q7L0L9 218 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 CNNM3Q8NE01 707 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 SH3RF3Q8TEJ3 882 aaPredicted RBP13.39□□□□□ -0.27
USF1-208ENST00000528768 PIBF1Q8WXW3 757 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 MRFAP1L1Q96HT8 127 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 ZDHHC15Q96MV8 337 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 PHF20Q9BVI0 1012 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 SH3GLB2Q9NR46 395 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 ZNF112Q9UJU3 913 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 KCNH3Q9ULD8 1083 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 RPTORQ8N122 1335 aa13.39□□□□□ -0.27
USF1-208ENST00000528768 GPR75-ASB3A0A0A6YYF3 556 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 TNPO2O14787 897 aaKnown RBP13.38□□□□□ -0.27
USF1-208ENST00000528768 GUCY1A2P33402 732 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 BTDP43251 543 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 NLRP5P59047 1200 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 GALNT17Q6IS24 598 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 C7orf61Q8IZ16 206 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 COA7Q96BR5 231 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
USF1-208ENST00000528768 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 GABRQQ9UN88 632 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
USF1-208ENST00000528768 MGAMO43451 1857 aa13.38□□□□□ -0.27
USF1-208ENST00000528768 NRDCO43847 1150 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 CYP2D6P10635 497 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 SCG2P13521 617 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 FUT2Q10981 343 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 MOGSQ13724 837 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
USF1-208ENST00000528768 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 KRBA2Q6ZNG9 492 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
USF1-208ENST00000528768 SPC24Q8NBT2 197 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 CCDC148Q8NFR7 591 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 TGFBRAP1Q8WUH2 860 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
USF1-208ENST00000528768 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.27
USF1-208ENST00000528768 CABP5Q9NP86 173 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 PRDM6Q9NQX0 595 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 VPS54Q9P1Q0 977 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 TUBE1Q9UJT0 475 aa13.37□□□□□ -0.27
USF1-208ENST00000528768 IKBKBO14920 756 aa13.36□□□□□ -0.27
USF1-208ENST00000528768 CBFA2T2O43439 604 aa13.36□□□□□ -0.27
USF1-208ENST00000528768 SMC2O95347 1197 aa13.36□□□□□ -0.27
USF1-208ENST00000528768 PLEKHA8P1O95397 391 aa13.36□□□□□ -0.27
USF1-208ENST00000528768 ELNP15502 786 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms