RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 RCSD1Q6JBY9 416 aa27.96■■■□□ 2.07
CPSF1-202ENST00000527827 CCDC129Q6ZRS4 1044 aa27.96■■■□□ 2.07
CPSF1-202ENST00000527827 RASGRP2Q7LDG7 609 aa27.96■■■□□ 2.07
CPSF1-202ENST00000527827 TMEM199Q8N511 208 aa27.96■■■□□ 2.07
CPSF1-202ENST00000527827 SLC43A3Q8NBI5 491 aa27.96■■■□□ 2.07
CPSF1-202ENST00000527827 STX8Q9UNK0 236 aa27.96■■■□□ 2.07
CPSF1-202ENST00000527827 NMT2O60551 498 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 ACRP10323 421 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 ALAS1P13196 640 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 PTGS1P23219 599 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 CTDSPL2Q05D32 466 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 MUM1L1Q5H9M0 696 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 PPP4R3BQ5MIZ7 849 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 CCDC174Q6PII3 467 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 CXCL17Q6UXB2 119 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 PRR12Q9ULL5 1215 aa27.95■■■□□ 2.06
CPSF1-202ENST00000527827 GRXCR1A8MXD5 290 aa27.94■■■□□ 2.06
CPSF1-202ENST00000527827 PBX2P40425 430 aa27.94■■■□□ 2.06
CPSF1-202ENST00000527827 ZNF365Q70YC5 407 aa27.94■■■□□ 2.06
CPSF1-202ENST00000527827 NOL8Q76FK4 1167 aaKnown RBP27.94■■■□□ 2.06
CPSF1-202ENST00000527827 TLK2Q86UE8 772 aa27.94■■■□□ 2.06
CPSF1-202ENST00000527827 USP38Q8NB14 1042 aa27.94■■■□□ 2.06
CPSF1-202ENST00000527827 PBX4Q9BYU1 374 aa27.94■■■□□ 2.06
CPSF1-202ENST00000527827 MYO9BQ13459 2157 aa27.93■■■□□ 2.06
CPSF1-202ENST00000527827 TSPY2A6NKD2 308 aa27.93■■■□□ 2.06
CPSF1-202ENST00000527827 SMPD1P17405 629 aa27.93■■■□□ 2.06
CPSF1-202ENST00000527827 CYP2C18P33260 490 aa27.93■■■□□ 2.06
CPSF1-202ENST00000527827 PDGFCQ9NRA1 345 aa27.93■■■□□ 2.06
CPSF1-202ENST00000527827 CYP39A1Q9NYL5 469 aa27.93■■■□□ 2.06
CPSF1-202ENST00000527827 GRIN2DO15399 1336 aa27.92■■■□□ 2.06
CPSF1-202ENST00000527827 SALL3Q9BXA9 1300 aa27.92■■■□□ 2.06
CPSF1-202ENST00000527827 TTC28Q96AY4 2481 aa27.92■■■□□ 2.06
CPSF1-202ENST00000527827 CABYRO75952 493 aa27.92■■■□□ 2.06
CPSF1-202ENST00000527827 MX1P20591 662 aa27.92■■■□□ 2.06
CPSF1-202ENST00000527827 NOVP48745 357 aa27.92■■■□□ 2.06
CPSF1-202ENST00000527827 FSCN1Q16658 493 aaKnown RBP27.92■■■□□ 2.06
CPSF1-202ENST00000527827 TAPT1Q6NXT6 567 aa27.92■■■□□ 2.06
CPSF1-202ENST00000527827 PSRC1Q6PGN9 363 aaPredicted RBP27.92■■■□□ 2.06
CPSF1-202ENST00000527827 ITGA7Q13683 1181 aa27.91■■■□□ 2.06
CPSF1-202ENST00000527827 TMEM63BQ5T3F8 832 aa27.91■■■□□ 2.06
CPSF1-202ENST00000527827 VPS53Q5VIR6 699 aa27.91■■■□□ 2.06
CPSF1-202ENST00000527827 IL23AQ9NPF7 189 aa27.91■■■□□ 2.06
CPSF1-202ENST00000527827 ANAPC4Q9UJX5 808 aa27.91■■■□□ 2.06
CPSF1-202ENST00000527827 DYNC1LI2O43237 492 aaPredicted RBP27.9■■■□□ 2.06
CPSF1-202ENST00000527827 IQSEC1Q6DN90 963 aa27.9■■■□□ 2.06
CPSF1-202ENST00000527827 EEPD1Q7L9B9 569 aa27.9■■■□□ 2.06
CPSF1-202ENST00000527827 FBXO16Q8IX29 292 aaPredicted RBP27.9■■■□□ 2.06
CPSF1-202ENST00000527827 PURBQ96QR8 312 aaKnown RBP27.9■■■□□ 2.06
CPSF1-202ENST00000527827 AP5M1Q9H0R1 490 aa27.9■■■□□ 2.06
CPSF1-202ENST00000527827 UMODL1Q5DID0 1318 aa27.9■■■□□ 2.06
CPSF1-202ENST00000527827 GBF1Q92538 1859 aa27.89■■■□□ 2.06
CPSF1-202ENST00000527827 CHD9Q3L8U1 2897 aa27.89■■■□□ 2.06
CPSF1-202ENST00000527827 MORC4Q8TE76 937 aa27.89■■■□□ 2.06
CPSF1-202ENST00000527827 HERVK_113Q902F9 699 aa27.89■■■□□ 2.06
CPSF1-202ENST00000527827 CCPG1Q9ULG6 757 aa27.89■■■□□ 2.06
CPSF1-202ENST00000527827 RANBP6O60518 1105 aaKnown RBP27.88■■■□□ 2.05
CPSF1-202ENST00000527827 NSMFQ6X4W1 530 aa27.88■■■□□ 2.05
CPSF1-202ENST00000527827 HIPK3Q9H422 1215 aa27.88■■■□□ 2.05
CPSF1-202ENST00000527827 CXXC1Q9P0U4 656 aaPredicted RBP27.88■■■□□ 2.05
CPSF1-202ENST00000527827 MTMR7Q9Y216 660 aa27.88■■■□□ 2.05
CPSF1-202ENST00000527827 Q9Y3F1 56 aa27.88■■■□□ 2.05
CPSF1-202ENST00000527827 ORC4O43929 436 aa27.87■■■□□ 2.05
CPSF1-202ENST00000527827 ICAM1P05362 532 aa27.87■■■□□ 2.05
CPSF1-202ENST00000527827 FGRP09769 529 aa27.87■■■□□ 2.05
CPSF1-202ENST00000527827 TTBK2Q6IQ55 1244 aa27.87■■■□□ 2.05
CPSF1-202ENST00000527827 DCAF4Q8WV16 495 aa27.87■■■□□ 2.05
CPSF1-202ENST00000527827 RANBP17Q9H2T7 1088 aaKnown RBP27.87■■■□□ 2.05
CPSF1-202ENST00000527827 VTA1Q9NP79 307 aa27.87■■■□□ 2.05
CPSF1-202ENST00000527827 ZEB2O60315 1214 aa27.86■■■□□ 2.05
CPSF1-202ENST00000527827 PSMC6P62333 389 aa27.86■■■□□ 2.05
CPSF1-202ENST00000527827 CCDC96Q2M329 555 aa27.86■■■□□ 2.05
CPSF1-202ENST00000527827 BTNL9Q6UXG8 535 aa27.86■■■□□ 2.05
CPSF1-202ENST00000527827 SYMPKQ92797 1274 aaKnown RBP27.86■■■□□ 2.05
CPSF1-202ENST00000527827 SEZ6LQ9BYH1 1024 aa27.86■■■□□ 2.05
CPSF1-202ENST00000527827 TRPV6Q9H1D0 765 aa27.86■■■□□ 2.05
CPSF1-202ENST00000527827 PRDM12Q9H4Q4 367 aa27.86■■■□□ 2.05
CPSF1-202ENST00000527827 B4GALT4O60513 344 aa27.85■■■□□ 2.05
CPSF1-202ENST00000527827 FGBP02675 491 aa27.85■■■□□ 2.05
CPSF1-202ENST00000527827 SLC16A2P36021 539 aa27.85■■■□□ 2.05
CPSF1-202ENST00000527827 ALX1Q15699 326 aa27.85■■■□□ 2.05
CPSF1-202ENST00000527827 NOC4LQ9BVI4 516 aaKnown RBP27.85■■■□□ 2.05
CPSF1-202ENST00000527827 PRDM6Q9NQX0 595 aa27.85■■■□□ 2.05
CPSF1-202ENST00000527827 CCL23P55773 120 aa27.84■■■□□ 2.05
CPSF1-202ENST00000527827 BAATQ14032 418 aaPredicted RBP27.84■■■□□ 2.05
CPSF1-202ENST00000527827 KIAA1211Q6ZU35 1233 aa27.84■■■□□ 2.05
CPSF1-202ENST00000527827 EVI5LQ96CN4 794 aa27.84■■■□□ 2.05
CPSF1-202ENST00000527827 GAS2L1Q99501 681 aaPredicted RBP27.84■■■□□ 2.05
CPSF1-202ENST00000527827 WNT8AQ9H1J5 351 aa27.84■■■□□ 2.05
CPSF1-202ENST00000527827 RAB30Q15771 203 aa27.83■■■□□ 2.05
CPSF1-202ENST00000527827 DUSP28Q4G0W2 176 aa27.83■■■□□ 2.05
CPSF1-202ENST00000527827 TJAP1Q5JTD0 557 aa27.83■■■□□ 2.05
CPSF1-202ENST00000527827 HELLSQ9NRZ9 838 aa27.83■■■□□ 2.05
CPSF1-202ENST00000527827 NFIBO00712 420 aa27.82■■■□□ 2.04
CPSF1-202ENST00000527827 ALDH5A1P51649 535 aaPredicted RBP27.82■■■□□ 2.04
CPSF1-202ENST00000527827 SYDE2Q5VT97 1194 aa27.82■■■□□ 2.04
CPSF1-202ENST00000527827 OTOP2Q7RTS6 562 aa27.82■■■□□ 2.04
CPSF1-202ENST00000527827 VWCEQ96DN2 955 aa27.82■■■□□ 2.04
CPSF1-202ENST00000527827 TMEM47Q9BQJ4 181 aa27.82■■■□□ 2.04
CPSF1-202ENST00000527827 MTIF3Q9H2K0 278 aaKnown RBP27.82■■■□□ 2.04
CPSF1-202ENST00000527827 MSRAQ9UJ68 235 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms