RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 TINF2Q9BSI4 451 aa8.85□□□□□ -0.99
COPB1-204ENST00000526191 TNFRSF12AQ9NP84 129 aa8.85□□□□□ -0.99
COPB1-204ENST00000526191 AURKAO14965 403 aa8.84□□□□□ -0.99
COPB1-204ENST00000526191 VIPR1P32241 457 aa8.84□□□□□ -0.99
COPB1-204ENST00000526191 LAPTM5Q13571 262 aa8.84□□□□□ -0.99
COPB1-204ENST00000526191 VPS37DQ86XT2 251 aa8.84□□□□□ -0.99
COPB1-204ENST00000526191 JAMLQ86YT9 394 aa8.84□□□□□ -0.99
COPB1-204ENST00000526191 KLHL14Q9P2G3 628 aa8.84□□□□□ -0.99
COPB1-204ENST00000526191 ANKRD34BA5PLL1 514 aa8.83□□□□□ -1
COPB1-204ENST00000526191 NUDT19A8MXV4 375 aa8.83□□□□□ -1
COPB1-204ENST00000526191 ETFBP38117 255 aa8.83□□□□□ -1
COPB1-204ENST00000526191 ARL4AP40617 200 aa8.83□□□□□ -1
COPB1-204ENST00000526191 YBX1P67809 324 aaKnown RBP8.83□□□□□ -1
COPB1-204ENST00000526191 RCSD1Q6JBY9 416 aa8.83□□□□□ -1
COPB1-204ENST00000526191 RCC1LQ96I51 464 aaKnown RBP8.83□□□□□ -1
COPB1-204ENST00000526191 PODXL2Q9NZ53 605 aa8.83□□□□□ -1
COPB1-204ENST00000526191 MBD1Q9UIS9 605 aaPredicted RBP8.83□□□□□ -1
COPB1-204ENST00000526191 MPOP05164 745 aa8.82□□□□□ -1
COPB1-204ENST00000526191 FGRP09769 529 aa8.82□□□□□ -1
COPB1-204ENST00000526191 LINC00310P59036 64 aa8.82□□□□□ -1
COPB1-204ENST00000526191 AMPD2Q01433 879 aa8.82□□□□□ -1
COPB1-204ENST00000526191 RAB3GAP1Q15042 981 aa8.82□□□□□ -1
COPB1-204ENST00000526191 SPOCD1Q6ZMY3 1216 aa8.82□□□□□ -1
COPB1-204ENST00000526191 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.82□□□□□ -15e-10■□□□□ 10.8
COPB1-204ENST00000526191 LGR4Q9BXB1 951 aa8.82□□□□□ -1
COPB1-204ENST00000526191 CNTD2Q9H8S5 307 aa8.82□□□□□ -1
COPB1-204ENST00000526191 ACTR10Q9NZ32 417 aa8.82□□□□□ -1
COPB1-204ENST00000526191 CCDC180Q9P1Z9 1646 aa8.82□□□□□ -1
COPB1-204ENST00000526191 A0A1W2PQ27 194 aa8.81□□□□□ -1
COPB1-204ENST00000526191 A0A1W2PQ64 194 aa8.81□□□□□ -1
COPB1-204ENST00000526191 A0A1W2PQC6 194 aa8.81□□□□□ -1
COPB1-204ENST00000526191 A0A1W2PQD8 194 aa8.81□□□□□ -1
COPB1-204ENST00000526191 B2RBV5 119 aa8.81□□□□□ -1
COPB1-204ENST00000526191 HRKO00198 91 aa8.81□□□□□ -1
COPB1-204ENST00000526191 GRB10Q13322 594 aa8.81□□□□□ -1
COPB1-204ENST00000526191 GNL2Q13823 731 aaKnown RBP8.81□□□□□ -1
COPB1-204ENST00000526191 LARP1BQ659C4 914 aaKnown RBP8.81□□□□□ -1
COPB1-204ENST00000526191 C6orf15Q6UXA7 325 aaPredicted RBP8.81□□□□□ -1
COPB1-204ENST00000526191 LCNL1Q6ZST4 164 aa8.81□□□□□ -1
COPB1-204ENST00000526191 SIRT5Q9NXA8 310 aa8.81□□□□□ -1
COPB1-204ENST00000526191 AKT3Q9Y243 479 aa8.81□□□□□ -1
COPB1-204ENST00000526191 BACE2Q9Y5Z0 518 aa8.81□□□□□ -1
COPB1-204ENST00000526191 TBC1D8O95759 1140 aa8.8□□□□□ -1
COPB1-204ENST00000526191 TACR1P25103 407 aa8.8□□□□□ -1
COPB1-204ENST00000526191 EPHB3P54753 998 aa8.8□□□□□ -1
COPB1-204ENST00000526191 NCAPHQ15003 741 aa8.8□□□□□ -1
COPB1-204ENST00000526191 EEF1DP3Q658K8 133 aa8.8□□□□□ -1
COPB1-204ENST00000526191 ZSCAN18Q8TBC5 510 aaPredicted RBP8.8□□□□□ -1
COPB1-204ENST00000526191 APBA2Q99767 749 aa8.8□□□□□ -1
COPB1-204ENST00000526191 PRKAG3Q9UGI9 489 aa8.8□□□□□ -1
COPB1-204ENST00000526191 C2orf71A6NGG8 1288 aa8.79□□□□□ -1
COPB1-204ENST00000526191 KCNH1O95259 989 aa8.79□□□□□ -1
COPB1-204ENST00000526191 SEPHS1P49903 392 aa8.79□□□□□ -1
COPB1-204ENST00000526191 ARID5AQ03989 594 aa8.79□□□□□ -1
COPB1-204ENST00000526191 RPTNQ6XPR3 784 aa8.79□□□□□ -1
COPB1-204ENST00000526191 TMC6Q7Z403 805 aa8.79□□□□□ -1
COPB1-204ENST00000526191 MCF2L2Q86YR7 1114 aa8.79□□□□□ -1
COPB1-204ENST00000526191 PPP1R14AQ96A00 147 aa8.79□□□□□ -1
COPB1-204ENST00000526191 ZNF408Q9H9D4 720 aa8.79□□□□□ -1
COPB1-204ENST00000526191 IGSF5Q9NSI5 407 aa8.79□□□□□ -1
COPB1-204ENST00000526191 EMC9Q9Y3B6 208 aa8.79□□□□□ -1
COPB1-204ENST00000526191 ABLIM1O14639 778 aa8.78□□□□□ -1
COPB1-204ENST00000526191 DNAJA1P31689 397 aaKnown RBP8.78□□□□□ -1
COPB1-204ENST00000526191 L1CAMP32004 1257 aa8.78□□□□□ -1
COPB1-204ENST00000526191 CDR1P51861 262 aa8.78□□□□□ -1
COPB1-204ENST00000526191 SSPNQ14714 243 aa8.78□□□□□ -1
COPB1-204ENST00000526191 TNNI3KQ59H18 835 aa8.78□□□□□ -1
COPB1-204ENST00000526191 CPNE8Q86YQ8 564 aa8.78□□□□□ -1
COPB1-204ENST00000526191 FAM178BQ8IXR5 827 aa8.78□□□□□ -1
COPB1-204ENST00000526191 BVESQ8NE79 360 aa8.78□□□□□ -1
COPB1-204ENST00000526191 MICAL1Q8TDZ2 1067 aa8.78□□□□□ -1
COPB1-204ENST00000526191 PDLIM7Q9NR12 457 aa8.78□□□□□ -1
COPB1-204ENST00000526191 NUAK1O60285 661 aa8.77□□□□□ -1.01
COPB1-204ENST00000526191 DBHP09172 617 aa8.77□□□□□ -1.01
COPB1-204ENST00000526191 ZSCAN22P10073 491 aaPredicted RBP8.77□□□□□ -1.01
COPB1-204ENST00000526191 PLEKHN1Q494U1 663 aaPredicted RBP8.77□□□□□ -1.01
COPB1-204ENST00000526191 CIAPIN1Q6FI81 312 aa8.77□□□□□ -1.01
COPB1-204ENST00000526191 IRF2BPLQ9H1B7 796 aa8.77□□□□□ -1.01
COPB1-204ENST00000526191 CNOT6Q9ULM6 557 aaKnown RBP8.77□□□□□ -1.01
COPB1-204ENST00000526191 HCFC2Q9Y5Z7 792 aa8.77□□□□□ -1.01
COPB1-204ENST00000526191 A0A1W2PQJ5 194 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 NAT2P11245 290 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 ZNF143P52747 638 aaPredicted RBP8.76□□□□□ -1.01
COPB1-204ENST00000526191 CORO7P57737 925 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 CBX2Q14781 532 aaPredicted RBP8.76□□□□□ -1.01
COPB1-204ENST00000526191 OLFML2BQ68BL8 750 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 BICRALQ6AI39 1079 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 MRM1Q6IN84 353 aaKnown RBP8.76□□□□□ -1.01
COPB1-204ENST00000526191 TRIM59Q8IWR1 403 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 MRGPRX3Q96LB0 322 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 FBLN5Q9UBX5 448 aa8.76□□□□□ -1.01
COPB1-204ENST00000526191 KRTAP4-8A0A0G2JLE6 195 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 N4BP3O15049 544 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 DDAH1O94760 285 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 PI3P19957 117 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 TMEM62Q0P6H9 643 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 SCRN1Q12765 414 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 KRTAP19-4Q3LI73 84 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 GTF2IRD2BQ6EKJ0 949 aa8.75□□□□□ -1.01
COPB1-204ENST00000526191 GTF2IRD2Q86UP8 949 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms