RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ATG4DQ86TL0 474 aaPredicted RBP6.34□□□□□ -1.39
USP48-211ENST00000526044 TTC6Q86TZ1 520 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 SLC43A3Q8NBI5 491 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 FAM168AQ92567 244 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 SMARCC1Q92922 1105 aaPredicted RBP6.34□□□□□ -1.39
USP48-211ENST00000526044 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 RC3H2Q9HBD1 1191 aaKnown RBP6.34□□□□□ -1.39
USP48-211ENST00000526044 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 DUSP13Q9UII6 198 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 ADAMTS6Q9UKP5 1117 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 FBXL21Q9UKT6 434 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 IQGAP3Q86VI3 1631 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 KDM5DQ9BY66 1539 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 FAM135AQ9P2D6 1515 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 PZPP20742 1482 aa6.34□□□□□ -1.4
USP48-211ENST00000526044 CEP152O94986 1710 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 CLTCQ00610 1675 aaKnown RBP6.33□□□□□ -1.4
USP48-211ENST00000526044 MROH1Q8NDA8 1641 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 VWDEQ8N2E2 1590 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 A0A1W2PQH9 124 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 SSBP05455 408 aaKnown RBP eCLIP6.33□□□□□ -1.4
USP48-211ENST00000526044 CEBPAP49715 358 aaPredicted RBP6.33□□□□□ -1.4
USP48-211ENST00000526044 CASP7P55210 303 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 PPP2R5EQ16537 467 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 TMC3Q7Z5M5 1100 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 CCDC144CPQ8IYA2 1237 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 DAGLBQ8NCG7 672 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 SYTL5Q8TDW5 730 aaPredicted RBP6.33□□□□□ -1.4
USP48-211ENST00000526044 CCDC120Q96HB5 630 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.33□□□□□ -1.44e-7■□□□□ 9
USP48-211ENST00000526044 PRDM14Q9GZV8 571 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 ZNF214Q9UL59 606 aaPredicted RBP6.33□□□□□ -1.4
USP48-211ENST00000526044 PCDHB12Q9Y5F1 795 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 PRDM15P57071 1507 aaPredicted RBP6.33□□□□□ -1.4
USP48-211ENST00000526044 CNTLNQ9NXG0 1405 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 TET3O43151 1660 aa6.33□□□□□ -1.4
USP48-211ENST00000526044 LTBP3Q9NS15 1303 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 FER1L4A9Z1Z3 1794 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 ABCC3O15438 1527 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 LMTK2Q8IWU2 1503 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 C9IYK1 514 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 LTKP29376 864 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 ZC3H6P61129 1189 aaKnown RBP6.32□□□□□ -1.4
USP48-211ENST00000526044 EGR3Q06889 387 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 SNW1Q13573 536 aaKnown RBP6.32□□□□□ -1.4
USP48-211ENST00000526044 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 C7orf61Q8IZ16 206 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 ZNF655Q8N720 491 aaPredicted RBP6.32□□□□□ -1.4
USP48-211ENST00000526044 ALPK1Q96QP1 1244 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 HDAC8Q9BY41 377 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 PHAXQ9H814 394 aaKnown RBP6.32□□□□□ -1.4
USP48-211ENST00000526044 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.32□□□□□ -1.4
USP48-211ENST00000526044 ADAMTSL3P82987 1691 aa6.32□□□□□ -1.4
USP48-211ENST00000526044 ZC3H13Q5T200 1668 aaKnown RBP6.32□□□□□ -1.4
USP48-211ENST00000526044 CLSPNQ9HAW4 1339 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 E9PCH4 1651 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 SIGLEC6O43699 453 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 TP53P04637 393 aaPredicted RBP6.31□□□□□ -1.4
USP48-211ENST00000526044 DNAJA1P31689 397 aaKnown RBP6.31□□□□□ -1.4
USP48-211ENST00000526044 GNPTABQ3T906 1256 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
USP48-211ENST00000526044 PPFIBP1Q86W92 1011 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 FAM169BQ8N8A8 192 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 LRRN4CLQ8ND94 238 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 SIN3AQ96ST3 1273 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 GMLQ99445 158 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 PCDHA11Q9Y5I1 949 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 MRVI1Q9Y6F6 885 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 CAMSAP1Q5T5Y3 1602 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 ARHGAP31Q2M1Z3 1444 aa6.31□□□□□ -1.4
USP48-211ENST00000526044 MROH2AA6NES4 1674 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 RPRD2Q5VT52 1461 aaKnown RBP6.3□□□□□ -1.4
USP48-211ENST00000526044 PRAMEF1O95521 474 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 FGRP09769 529 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 SLC7A5Q01650 507 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
USP48-211ENST00000526044 USHBP1Q8N6Y0 703 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
USP48-211ENST00000526044 TCTN2Q96GX1 697 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 FAM84AQ96KN4 292 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 CHST7Q9NS84 486 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 SLC52A1Q9NWF4 448 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 SLAMF8Q9P0V8 285 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 NPATQ14207 1427 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 ANKRD30BQ9BXX2 1392 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 EFCAB6Q5THR3 1501 aa6.3□□□□□ -1.4
USP48-211ENST00000526044 RIMS1Q86UR5 1692 aaKnown RBP6.3□□□□□ -1.4
USP48-211ENST00000526044 MADDQ8WXG6 1647 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 SSU72P8A0A1W2PR75 194 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
USP48-211ENST00000526044 IDI1Q13907 227 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 TCEAL1Q15170 157 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 NAALADL2Q58DX5 795 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 TNNI3KQ59H18 835 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 NOL9Q5SY16 702 aaKnown RBP6.29□□□□□ -1.4
USP48-211ENST00000526044 DCAF15Q66K64 600 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 RNF111Q6ZNA4 994 aa6.29□□□□□ -1.4
USP48-211ENST00000526044 MCF2L2Q86YR7 1114 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms