RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 TRIM43Q96BQ3 446 aaPredicted RBP14.19□□□□□ -0.14
SSBP3-210ENST00000525990 CYP39A1Q9NYL5 469 aa14.19□□□□□ -0.14
SSBP3-210ENST00000525990 CTAGE5O15320 804 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 C6orf222P0C671 652 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-210ENST00000525990 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 ACLYP53396 1101 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 KCNA10Q16322 511 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 TKFCQ3LXA3 575 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 SLC30A10Q6XR72 485 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 Q7L0L9 218 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 EEPD1Q7L9B9 569 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 ESR2Q92731 530 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 DSCC1Q9BVC3 393 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 ABHD16BQ9H3Z7 469 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 RNF41Q9H4P4 317 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-210ENST00000525990 PDGFCQ9NRA1 345 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 TAF6LQ9Y6J9 622 aa14.18□□□□□ -0.14
SSBP3-210ENST00000525990 KIAA1217Q5T5P2 1943 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 HIP1O00291 1037 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 PQBP1O60828 265 aaKnown RBP14.17□□□□□ -0.14
SSBP3-210ENST00000525990 DUSP11O75319 330 aaKnown RBP14.17□□□□□ -0.14
SSBP3-210ENST00000525990 BEX3Q00994 111 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 PTH1RQ03431 593 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 FBXO16Q8IX29 292 aaPredicted RBP14.17□□□□□ -0.14
SSBP3-210ENST00000525990 CLEC4DQ8WXI8 215 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 BADQ92934 168 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 UBA5Q9GZZ9 404 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 ZSWIM5Q9P217 1185 aa14.17□□□□□ -0.14
SSBP3-210ENST00000525990 PCP11498 1178 aaKnown RBP14.16□□□□□ -0.14
SSBP3-210ENST00000525990 BAATQ14032 418 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-210ENST00000525990 IMMTQ16891 758 aaKnown RBP14.16□□□□□ -0.14
SSBP3-210ENST00000525990 C9orf50Q5SZB4 431 aa14.16□□□□□ -0.14
SSBP3-210ENST00000525990 C1orf53Q5VUE5 145 aa14.16□□□□□ -0.14
SSBP3-210ENST00000525990 SKAP1Q86WV1 359 aa14.16□□□□□ -0.14
SSBP3-210ENST00000525990 ENAHQ8N8S7 591 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-210ENST00000525990 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
SSBP3-210ENST00000525990 TTC14Q96N46 770 aa14.16□□□□□ -0.14
SSBP3-210ENST00000525990 LBHD1Q9BQE6 289 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-210ENST00000525990 UPF3AQ9H1J1 476 aaKnown RBP14.16□□□□□ -0.14
SSBP3-210ENST00000525990 PRKAG2Q9UGJ0 569 aa14.16□□□□□ -0.14
SSBP3-210ENST00000525990 TNKSO95271 1327 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 PTPDC1A2A3K4 754 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 ASGR1P07306 291 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 SMPD1P17405 629 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 CHMLP26374 656 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 GJA9P57773 515 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 TNFAIP2Q03169 654 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 LRIT3Q3SXY7 679 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 USH1GQ495M9 461 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 TAPT1Q6NXT6 567 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 CYB5R4Q7L1T6 521 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 ZSCAN10Q96SZ4 725 aaPredicted RBP14.15□□□□□ -0.14
SSBP3-210ENST00000525990 STARD7Q9NQZ5 370 aa14.15□□□□□ -0.14
SSBP3-210ENST00000525990 BAZ2BQ9UIF8 2168 aaKnown RBP14.15□□□□□ -0.15
SSBP3-210ENST00000525990 ASB14A6NK59 587 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 CLTBP09497 229 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 CST5P28325 142 aaPredicted RBP14.14□□□□□ -0.15
SSBP3-210ENST00000525990 ALDH5A1P51649 535 aaPredicted RBP14.14□□□□□ -0.15
SSBP3-210ENST00000525990 EPHB4P54760 987 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 FAAP100Q0VG06 881 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 SHHQ15465 462 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 NOL8Q76FK4 1167 aaKnown RBP14.14□□□□□ -0.15
SSBP3-210ENST00000525990 TLK2Q86UE8 772 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 DGKHQ86XP1 1220 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 TSEN34Q9BSV6 310 aaKnown RBP14.14□□□□□ -0.15
SSBP3-210ENST00000525990 GNEQ9Y223 722 aaKnown RBP14.14□□□□□ -0.15
SSBP3-210ENST00000525990 GBF1Q92538 1859 aa14.14□□□□□ -0.15
SSBP3-210ENST00000525990 MYH7BA7E2Y1 1941 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 MOXD2PA6NHM9 499 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 CALML3P27482 149 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 CDC37Q16543 378 aaPredicted RBP14.13□□□□□ -0.15
SSBP3-210ENST00000525990 GNASQ5JWF2 1037 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 STAG2Q8N3U4 1231 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 TBC1D5Q92609 795 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 KAT14Q9H8E8 782 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 SENP2Q9HC62 589 aa14.13□□□□□ -0.15
SSBP3-210ENST00000525990 CYP21A2P08686 494 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 RPS6P62753 249 aaKnown RBP14.12□□□□□ -0.15
SSBP3-210ENST00000525990 COL9A3Q14050 684 aaPredicted RBP14.12□□□□□ -0.15
SSBP3-210ENST00000525990 SEC23AQ15436 765 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 GPATCH4Q5T3I0 446 aaKnown RBP14.12□□□□□ -0.15
SSBP3-210ENST00000525990 CXCL17Q6UXB2 119 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 RNF207Q6ZRF8 634 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 STOX1Q6ZVD7 989 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 ANKRD33Q7Z3H0 272 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 ADGRF4Q8IZF3 695 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 DEFB123Q8N688 67 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 MORC4Q8TE76 937 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 NUP133Q8WUM0 1156 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 CTNNA3Q9UI47 895 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 WDR19Q8NEZ3 1342 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 RAD50Q92878 1312 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 SCN5AQ14524 2016 aa14.12□□□□□ -0.15
SSBP3-210ENST00000525990 KIAA0355O15063 1070 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 DYNC1LI2O43237 492 aaPredicted RBP14.11□□□□□ -0.15
SSBP3-210ENST00000525990 RAG1P15918 1043 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 CDK7P50613 346 aa14.11□□□□□ -0.15
SSBP3-210ENST00000525990 SLC35G1Q2M3R5 365 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms