RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 SAMSN1Q9NSI8 373 aaKnown RBP9.17□□□□□ -0.94
CHD7-203ENST00000525508 DDX41Q9UJV9 622 aaKnown RBP9.17□□□□□ -0.94
CHD7-203ENST00000525508 SYNJ2BP-COX16A0A087WUM0 186 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 KCNK3O14649 394 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 NDC80O14777 642 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 PRPF6O94906 941 aaKnown RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 ATP1A3P13637 1013 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 CDK8P49336 464 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 GRAPQ13588 217 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 GRAPLQ8TC17 118 aaPredicted RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 TSGA10Q9BZW7 698 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 NACA2Q9H009 215 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 FAM204AQ9H8W3 233 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 COX16Q9P0S2 106 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 AFF2P51816 1311 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 ANKARQ7Z5J8 1434 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 BMP3P12645 472 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 IFNAR1P17181 557 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 OSTNP61366 133 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 CUL4AQ13619 759 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 CASC4Q6P4E1 433 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 OTUD6AQ7L8S5 288 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 PHLDB2Q86SQ0 1253 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 MICALL1Q8N3F8 863 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 POMGNT1Q8WZA1 660 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 HOOK2Q96ED9 719 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 RABGAP1Q9Y3P9 1069 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 HNRNPDLO14979 420 aaKnown RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 GTPBP6O43824 516 aaPredicted RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 FMNL1O95466 1100 aaPredicted RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 POLGP54098 1239 aaPredicted RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 HDXQ7Z353 690 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 TUBGCP2Q9BSJ2 902 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 KANSL2Q9H9L4 492 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 PPANQ9NQ55 473 aaKnown RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 BSDC1Q9NW68 430 aaPredicted RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 IMPACTQ9P2X3 320 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 EBAG9O00559 213 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 RPS6KA4O75676 772 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 GABPB1Q06547 395 aaPredicted RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 GPATCH4Q5T3I0 446 aaKnown RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 LIN9Q5TKA1 542 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 GIMAP7Q8NHV1 300 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 LARP4BQ92615 738 aaKnown RBP9.16□□□□□ -0.94
CHD7-203ENST00000525508 CCDC17Q96LX7 622 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 ZNF577Q9BSK1 485 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 KDM5DQ9BY66 1539 aa9.16□□□□□ -0.94
CHD7-203ENST00000525508 INO80B-WBP1J3KQ70 363 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 TUBB4AP04350 444 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 FERP16591 822 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 NR2F2P24468 414 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 SPATA1Q5VX52 437 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 LRRC8AQ8IWT6 810 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 INO80BQ9C086 356 aaPredicted RBP9.15□□□□□ -0.94
CHD7-203ENST00000525508 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD7-203ENST00000525508 MMP1P03956 469 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 CYP19A1P11511 503 aaPredicted RBP9.15□□□□□ -0.94
CHD7-203ENST00000525508 CYB5R4Q7L1T6 521 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 DPP9Q86TI2 863 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 CEP57Q86XR8 500 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 UBL4BQ8N7F7 174 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 FAM76AQ8TAV0 307 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 CNOT6LQ96LI5 555 aaKnown RBP9.15□□□□□ -0.94
CHD7-203ENST00000525508 TEKT3Q9BXF9 490 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
CHD7-203ENST00000525508 PCDHA4Q9UN74 947 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 COL4A3BPQ9Y5P4 624 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 PDE4DIPQ5VU43 2346 aa9.15□□□□□ -0.94
CHD7-203ENST00000525508 USP17L15C9J2P7 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L11C9JVI0 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L18D6R9N7 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L22D6RA61 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L19D6RCP7 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L20D6RJB6 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 ZMYND10O75800 440 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 TMOD1P28289 359 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L24Q0WX57 530 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 SPOUT1Q5T280 376 aaKnown RBP9.15□□□□□ -0.95
CHD7-203ENST00000525508 USP17L6PQ6QN14 398 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 CACTINQ8WUQ7 758 aaKnown RBP9.15□□□□□ -0.95
CHD7-203ENST00000525508 SAR1BQ9Y6B6 198 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 ADGBQ8N7X0 1667 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 EHHADHQ08426 723 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 GEN1Q17RS7 908 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 C10orf67Q8IYJ2 551 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 DPH5Q9H2P9 285 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 FOXP1Q9H334 677 aaPredicted RBP9.15□□□□□ -0.95
CHD7-203ENST00000525508 PI4KBQ9UBF8 816 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 RCOR1Q9UKL0 485 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.95
CHD7-203ENST00000525508 ATF7P17544 494 aaPredicted RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 TOB2Q14106 344 aaPredicted RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 ARID5BQ14865 1188 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 CD209Q9NNX6 404 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 UTP11Q9Y3A2 253 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms