RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 GRM2Q14416 872 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 KIAA0319Q5VV43 1072 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 NECAB2Q7Z6G3 386 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 MICALL1Q8N3F8 863 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 WNK4Q96J92 1243 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 SRCIN1Q9C0H9 1055 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 NYXQ9GZU5 481 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 ABCC12Q96J65 1359 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 UBR2Q8IWV8 1755 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 DYRK3O43781 588 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 SIN3BO75182 1162 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 CTSHP09668 335 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 USP17L7P0C7H9 530 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 LACTBP83111 547 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-203ENST00000524927 PRAMEF18Q5VWM3 479 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 SP8Q8IXZ3 490 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 RNF34Q969K3 372 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 PAWRQ96IZ0 340 aaKnown RBP9.35□□□□□ -0.91
NEDD8-203ENST00000524927 PTPN18Q99952 460 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
NEDD8-203ENST00000524927 TFRCP02786 760 aaKnown RBP9.34□□□□□ -0.91
NEDD8-203ENST00000524927 NID1P14543 1247 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 ALAS2P22557 587 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 ZNF76P36508 570 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 NRLP54845 237 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 HDLBPQ00341 1268 aaKnown RBP9.34□□□□□ -0.91
NEDD8-203ENST00000524927 EIF4A2Q14240 407 aaKnown RBP9.34□□□□□ -0.91
NEDD8-203ENST00000524927 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-203ENST00000524927 HFE2Q6ZVN8 426 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 OSMRQ99650 979 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 ARHGAP39Q9C0H5 1083 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 TTYH1Q9H313 450 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-203ENST00000524927 EPHX3Q9H6B9 360 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 RIPOR2Q9Y4F9 1068 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 ROCK2O75116 1388 aaKnown RBP9.34□□□□□ -0.91
NEDD8-203ENST00000524927 TAF1P21675 1872 aa9.34□□□□□ -0.91
NEDD8-203ENST00000524927 KIF4AO95239 1232 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 A1BGP04217 495 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 VIL1P09327 827 aaKnown RBP9.33□□□□□ -0.92
NEDD8-203ENST00000524927 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-203ENST00000524927 NHLH1Q02575 133 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 TAF1CQ15572 869 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-203ENST00000524927 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 C20orf204Q6ZNR8 217 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 RAET1EQ8TD07 263 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 LIN7BQ9HAP6 207 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
NEDD8-203ENST00000524927 SRRDQ9UH36 339 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
NEDD8-203ENST00000524927 RTL9Q8NET4 1388 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 HEG1Q9ULI3 1381 aa9.33□□□□□ -0.92
NEDD8-203ENST00000524927 J3QW42 95 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 BBOX1O75936 387 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 ACPPP15309 386 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 HOXD10P28358 340 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 GSTT1P30711 240 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 FCGRTP55899 365 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 GPLD1P80108 840 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 PCSK7Q16549 785 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 TNFRSF25Q93038 417 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 RBSNQ9H1K0 784 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 DBNDD1Q9H9R9 158 aa9.32□□□□□ -0.92
NEDD8-203ENST00000524927 DNAJB12Q9NXW2 375 aaKnown RBP9.32□□□□□ -0.92
NEDD8-203ENST00000524927 ZBTB42B2RXF5 422 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 WDHD1O75717 1129 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-203ENST00000524927 GHRHP01286 108 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 HOXD8P13378 290 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-203ENST00000524927 TNNT2P45379 298 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-203ENST00000524927 FANCCQ00597 558 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 PRKG1Q13976 671 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 CEP120Q8N960 986 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 AGBL3Q8NEM8 1001 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 LGR6Q9HBX8 967 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 MYOZ2Q9NPC6 264 aa9.31□□□□□ -0.92
NEDD8-203ENST00000524927 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-203ENST00000524927 RNMTO43148 476 aaKnown RBP9.3□□□□□ -0.92
NEDD8-203ENST00000524927 PRRT3Q5FWE3 981 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 PRSS36Q5K4E3 855 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 MEI1Q5TIA1 1274 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 DTHD1Q6ZMT9 781 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 NT5DC4Q86YG4 428 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 DEFB118Q96PH6 123 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 DZANK1Q9NVP4 752 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 SCAF8Q9UPN6 1271 aaKnown RBP9.3□□□□□ -0.92
NEDD8-203ENST00000524927 AKAP2Q9Y2D5 859 aa9.3□□□□□ -0.92
NEDD8-203ENST00000524927 DUOX1Q9NRD9 1551 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 SCO2A0A1W2PP80 73 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 SMIM22K7EJ46 135 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 ECE2O60344 883 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 TLR2O60603 784 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 EIF2AK2P19525 551 aaKnown RBP9.29□□□□□ -0.92
NEDD8-203ENST00000524927 ADH7P40394 386 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 SMAD3P84022 425 aaKnown RBP9.29□□□□□ -0.92
NEDD8-203ENST00000524927 GLIS3Q8NEA6 775 aa9.29□□□□□ -0.92
NEDD8-203ENST00000524927 DIS3LQ8TF46 1054 aaKnown RBP9.29□□□□□ -0.92
NEDD8-203ENST00000524927 CLMNQ96JQ2 1002 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms