RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 NFXL1Q6ZNB6 911 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 CCDC50Q8IVM0 306 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 MREGQ8N565 214 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 ZNF507Q8TCN5 953 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 MAGEC3Q8TD91 643 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 CPLX3Q8WVH0 158 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 ATRIPQ8WXE1 791 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.53□□□□□ -1.523e-6■■■■■ 50.8
CTNNA1-241ENST00000524127 KAT2BQ92831 832 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 JAKMIP2Q96AA8 810 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 FAM89AQ96GI7 184 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 CABS1Q96KC9 395 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 MMS19Q96T76 1030 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 NUP88Q99567 741 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 RNF26Q9BY78 433 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 THAP9Q9H5L6 903 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 SEC31BQ9NQW1 1179 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 PIM2Q9P1W9 311 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 ZNF219Q9P2Y4 722 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 RNF14Q9UBS8 474 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 TSKSQ9UJT2 592 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 LUC7L2Q9Y383 392 aaKnown RBP5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 RTL9Q8NET4 1388 aa5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 ZNF646O15015 1829 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-241ENST00000524127 PDS5AQ29RF7 1337 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 LOC102724159A0A0B4J2E5 919 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 TCRBV5S4A2TA0A5A2 114 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 B4E1Z4 1266 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 PATL2C9JE40 543 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 IFIT3O14879 490 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 MEFVO15553 781 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 GRIN3BO60391 1043 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 HSF2BPO75031 334 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 IPO7O95373 1038 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 LCA5LO95447 670 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ATP1A1P05023 1023 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 PCCAP05165 728 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 TCP1P17987 556 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ARID4AP29374 1257 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 HOXA10P31260 410 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 HNRNPH3P31942 346 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 KRT2P35908 639 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ZAP70P43403 619 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 DNM2P50570 870 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 VAV2P52735 878 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 SMTNP53814 917 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 GNGT1P63211 74 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ZBED6P86452 979 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ATP2C1P98194 919 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 GRIN1Q05586 938 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 KCNB1Q14721 858 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 PWP2Q15269 919 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 E2F4Q16254 413 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 CCDC57Q2TAC2 916 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 HSP90AA4PQ58FG1 418 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 DALRD3Q5D0E6 543 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 CCDC122Q5T0U0 273 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 AKNAD1Q5T1N1 836 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 PDXDC2PQ6P474 469 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 KCNV1Q6PIU1 500 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ARHGAP27Q6ZUM4 889 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 KIAA1328Q86T90 577 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 MICU3Q86XE3 530 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 RAB11FIP4Q86YS3 637 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 CERS3Q8IU89 383 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ANKRD18AQ8IVF6 992 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 GRAMD1CQ8IYS0 662 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 TTLL6Q8N841 843 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 MB21D1Q8N884 522 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 TRIM58Q8NG06 486 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 CAGE1Q8TC20 777 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 BCAS4Q8TDM0 211 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 NELFBQ8WX92 580 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 P3H4Q92791 437 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 SYMPKQ92797 1274 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ZNF622Q969S3 477 aaKnown RBP eCLIP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 EDEM3Q9BZQ6 932 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 TTYH3Q9C0H2 523 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 RNF41Q9H4P4 317 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ACTR5Q9H9F9 607 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 MAGEF1Q9HAY2 307 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 GUCA1BQ9UMX6 200 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 SNX12Q9UMY4 172 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 CTNND2Q9UQB3 1225 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 ZNF652Q9Y2D9 606 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 CEP83Q9Y592 693 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 PCDHB6Q9Y5E3 794 aa5.52□□□□□ -1.53
CTNNA1-241ENST00000524127 A0A087X0B3 334 aa5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 TTC26A0AVF1 554 aa5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 WTIPA6NIX2 430 aaPredicted RBP5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 H0YIN7 160 aa5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 RNF225M0QZC1 329 aaPredicted RBP5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 PRPF3O43395 683 aaKnown RBP5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 USO1O60763 962 aaKnown RBP5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 TACC1O75410 805 aa5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 PARP1P09874 1014 aaKnown RBP5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 PDE6AP16499 860 aa5.51□□□□□ -1.53
CTNNA1-241ENST00000524127 ADORA1P30542 326 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms