RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 TMEM240Q5SV17 173 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 RCSD1Q6JBY9 416 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 SLC43A3Q8NBI5 491 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 OTUD7AQ8TE49 926 aaPredicted RBP9.35□□□□□ -0.91
GM2A-202ENST00000523004 VTI1AQ96AJ9 217 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 FSD1Q9BTV5 496 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 IL17RBQ9NRM6 502 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 RNF146Q9NTX7 359 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 GNEQ9Y223 722 aaKnown RBP9.35□□□□□ -0.91
GM2A-202ENST00000523004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
GM2A-202ENST00000523004 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 LCTP09848 1927 aa9.35□□□□□ -0.91
GM2A-202ENST00000523004 TLR3O15455 904 aaKnown RBP9.34□□□□□ -0.91
GM2A-202ENST00000523004 ALAS1P13196 640 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 CSF2RAP15509 400 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 NOVP48745 357 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 BEX3Q00994 111 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 IKQ13123 557 aaPredicted RBP9.34□□□□□ -0.91
GM2A-202ENST00000523004 CCDC174Q6PII3 467 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 TMEM199Q8N511 208 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 TIFAQ96CG3 184 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 TRERF1Q96PN7 1200 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 ZNF576Q9H609 170 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 CYP39A1Q9NYL5 469 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 ANAPC4Q9UJX5 808 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 PRR12Q9ULL5 1215 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
GM2A-202ENST00000523004 CHD9Q3L8U1 2897 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 CHD7Q9P2D1 2997 aa9.34□□□□□ -0.91
GM2A-202ENST00000523004 LRRC37A2A6NM11 1700 aa9.34□□□□□ -0.92
GM2A-202ENST00000523004 SALL3Q9BXA9 1300 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 TSPY2A6NKD2 308 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 NMT2O60551 498 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 CABYRO75952 493 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 MX1P20591 662 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 CYP2C18P33260 490 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 CTDSPL2Q05D32 466 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 AAMPQ13685 434 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 MUM1L1Q5H9M0 696 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 IQSEC1Q6DN90 963 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 TAPT1Q6NXT6 567 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 PSRC1Q6PGN9 363 aaPredicted RBP9.33□□□□□ -0.92
GM2A-202ENST00000523004 CXCL17Q6UXB2 119 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 CCDC129Q6ZRS4 1044 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 ZNF365Q70YC5 407 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 KCTD1Q719H9 257 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 NOL8Q76FK4 1167 aaKnown RBP9.33□□□□□ -0.92
GM2A-202ENST00000523004 TLK2Q86UE8 772 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 CHMP4CQ96CF2 233 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 PBX4Q9BYU1 374 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 PPP1R12CQ9BZL4 782 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 INCENPQ9NQS7 918 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 STX8Q9UNK0 236 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 Q9Y3F1 56 aa9.33□□□□□ -0.92
GM2A-202ENST00000523004 GRIN2DO15399 1336 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 GRXCR1A8MXD5 290 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 DYNC1LI2O43237 492 aaPredicted RBP9.32□□□□□ -0.92
GM2A-202ENST00000523004 ORC4O43929 436 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 ICAM1P05362 532 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 FGRP09769 529 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 ATXN8OSP0DMR3 200 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 ACRP10323 421 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 SMPD1P17405 629 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 PTGS1P23219 599 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 PBX2P40425 430 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 SNAP25P60880 206 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 ITGA7Q13683 1181 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 ALX1Q15699 326 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 FSCN1Q16658 493 aaKnown RBP9.32□□□□□ -0.92
GM2A-202ENST00000523004 BTNL9Q6UXG8 535 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 RASGRP2Q7LDG7 609 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 USP38Q8NB14 1042 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 MORC4Q8TE76 937 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 HERVK_113Q902F9 699 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 SEZ6LQ9BYH1 1024 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 AP5M1Q9H0R1 490 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 IL23AQ9NPF7 189 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 PDGFCQ9NRA1 345 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 DDX49Q9Y6V7 483 aaKnown RBP9.32□□□□□ -0.92
GM2A-202ENST00000523004 GBF1Q92538 1859 aa9.32□□□□□ -0.92
GM2A-202ENST00000523004 ZEB2O60315 1214 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
GM2A-202ENST00000523004 TMEM63BQ5T3F8 832 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 VPS53Q5VIR6 699 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 NSMFQ6X4W1 530 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 EEPD1Q7L9B9 569 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 FBXO16Q8IX29 292 aaPredicted RBP9.31□□□□□ -0.92
GM2A-202ENST00000523004 DCAF4Q8WV16 495 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
GM2A-202ENST00000523004 NOC4LQ9BVI4 516 aaKnown RBP9.31□□□□□ -0.92
GM2A-202ENST00000523004 RANBP17Q9H2T7 1088 aaKnown RBP9.31□□□□□ -0.92
GM2A-202ENST00000523004 HIPK3Q9H422 1215 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 VTA1Q9NP79 307 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 CXXC1Q9P0U4 656 aaPredicted RBP9.31□□□□□ -0.92
GM2A-202ENST00000523004 CCPG1Q9ULG6 757 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 UMODL1Q5DID0 1318 aa9.31□□□□□ -0.92
GM2A-202ENST00000523004 SCN10AQ9Y5Y9 1956 aa9.3□□□□□ -0.92
GM2A-202ENST00000523004 LOC102724159A0A0B4J2E5 919 aa9.3□□□□□ -0.92
GM2A-202ENST00000523004 B4GALT4O60513 344 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms