RNA–Protein interactions for RNA: ENST00000522978.1

UBXN2B-204, Transcript of UBX domain protein 2B, humanhuman

TSL 3

Gene UBXN2B, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-204ENST00000522978 KCNB2Q92953 911 aa20.77■□□□□ 0.92
UBXN2B-204ENST00000522978 CHMP4CQ96CF2 233 aa20.77■□□□□ 0.92
UBXN2B-204ENST00000522978 COL25A1Q9BXS0 654 aaPredicted RBP20.77■□□□□ 0.92
UBXN2B-204ENST00000522978 PDLIM7Q9NR12 457 aa20.77■□□□□ 0.92
UBXN2B-204ENST00000522978 CDH23Q9H251 3354 aa20.77■□□□□ 0.91
UBXN2B-204ENST00000522978 FRMPD2Q68DX3 1309 aaPredicted RBP20.77■□□□□ 0.91
UBXN2B-204ENST00000522978 TRIM43BA6NCK2 446 aa20.76■□□□□ 0.91
UBXN2B-204ENST00000522978 MCM5P33992 734 aa20.76■□□□□ 0.91
UBXN2B-204ENST00000522978 HSPA4P34932 840 aa20.76■□□□□ 0.91
UBXN2B-204ENST00000522978 STAT3P40763 770 aa20.76■□□□□ 0.91
UBXN2B-204ENST00000522978 TRIM43Q96BQ3 446 aaPredicted RBP20.76■□□□□ 0.91
UBXN2B-204ENST00000522978 PRR12Q9ULL5 1215 aa20.76■□□□□ 0.91
UBXN2B-204ENST00000522978 PRC1O43663 620 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 TAL1P17542 331 aaPredicted RBP20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 TLE2Q04725 743 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 KRT32Q14532 448 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 WTAPQ15007 396 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 ASPRV1Q53RT3 343 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 TMEM67Q5HYA8 995 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 SNRNP48Q6IEG0 339 aaKnown RBP20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 TTBK2Q6IQ55 1244 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 ABRAQ8N0Z2 381 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 IGDCC4Q8TDY8 1250 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 MMP19Q99542 508 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 GPCPD1Q9NPB8 672 aa20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 CTDP1Q9Y5B0 961 aaPredicted RBP20.75■□□□□ 0.91
UBXN2B-204ENST00000522978 LCTP09848 1927 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 PGK1P00558 417 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 COL9A3Q14050 684 aaPredicted RBP20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 SNX17Q15036 470 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 SYDE2Q5VT97 1194 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 TTC28Q96AY4 2481 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 LENG1Q96BZ8 264 aaPredicted RBP20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 TMEM87BQ96K49 555 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 CDX2Q99626 313 aaPredicted RBP20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 LY9Q9HBG7 655 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 XPNPEP3Q9NQH7 507 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 WDR19Q8NEZ3 1342 aa20.74■□□□□ 0.91
UBXN2B-204ENST00000522978 MYO9BQ13459 2157 aa20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 SLC16A2P36021 539 aa20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 NEK1Q96PY6 1258 aa20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 RANBP17Q9H2T7 1088 aaKnown RBP20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 SENP2Q9HC62 589 aa20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 RAVER2Q9HCJ3 691 aaKnown RBP20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 BAZ2BQ9UIF8 2168 aaKnown RBP20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 ZNF536O15090 1300 aa20.73■□□□□ 0.91
UBXN2B-204ENST00000522978 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 RARBP10826 455 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 ITGB8P26012 769 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 ADCK5Q3MIX3 580 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 CPXCR1Q8N123 301 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 TINF2Q9BSI4 451 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 SEMA6BQ9H3T3 888 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 RIPK3Q9Y572 518 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 MCM3APO60318 1980 aa20.72■□□□□ 0.91
UBXN2B-204ENST00000522978 SH2B2O14492 632 aaPredicted RBP20.71■□□□□ 0.91
UBXN2B-204ENST00000522978 GOLGA8HP0CJ92 632 aa20.71■□□□□ 0.91
UBXN2B-204ENST00000522978 KCTD2Q14681 263 aa20.71■□□□□ 0.91
UBXN2B-204ENST00000522978 MYLIPQ8WY64 445 aa20.71■□□□□ 0.91
UBXN2B-204ENST00000522978 USP26Q9BXU7 913 aa20.71■□□□□ 0.91
UBXN2B-204ENST00000522978 PHF24Q9UPV7 400 aa20.71■□□□□ 0.91
UBXN2B-204ENST00000522978 SNX14Q9Y5W7 946 aa20.71■□□□□ 0.91
UBXN2B-204ENST00000522978 PQBP1O60828 265 aaKnown RBP20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 ICAM1P05362 532 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 HMGB1P09429 215 aaKnown RBP20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 LIFRP42702 1097 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 SLC4A3P48751 1232 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 EPHB4P54760 987 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 TROAPQ12815 778 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 GRM4Q14833 912 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 ZNF792Q3KQV3 632 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 TMTC2Q8N394 836 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 CHST13Q8NET6 341 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 TTYH1Q9H313 450 aaPredicted RBP20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 FBXO40Q9UH90 709 aa20.7■□□□□ 0.9
UBXN2B-204ENST00000522978 DDAH1O94760 285 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 EXOSC10Q01780 885 aaKnown RBP20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 TKFCQ3LXA3 575 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 CCDC174Q6PII3 467 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 DHX32Q7L7V1 743 aaKnown RBP20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 CATIPQ7Z7H3 387 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 RNF180Q86T96 592 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 ZNF654Q8IZM8 581 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 MAFAQ8NHW3 353 aaPredicted RBP20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 AGBL1Q96MI9 1066 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 MAP3K14Q99558 947 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 GPHNQ9NQX3 736 aaPredicted RBP20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 MAD2L2Q9UI95 211 aa20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 SPTBN5Q9NRC6 3674 aaKnown RBP20.69■□□□□ 0.9
UBXN2B-204ENST00000522978 A0A1W2PQ45 241 aaPredicted RBP20.68■□□□□ 0.9
UBXN2B-204ENST00000522978 A0A1W2PQY0 241 aa20.68■□□□□ 0.9
UBXN2B-204ENST00000522978 PALM3A6NDB9 673 aaPredicted RBP20.68■□□□□ 0.9
UBXN2B-204ENST00000522978 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
UBXN2B-204ENST00000522978 CLTBP09497 229 aa20.68■□□□□ 0.9
UBXN2B-204ENST00000522978 ZNF865P0CJ78 1059 aaPredicted RBP20.68■□□□□ 0.9
UBXN2B-204ENST00000522978 SNAP25P60880 206 aa20.68■□□□□ 0.9
UBXN2B-204ENST00000522978 C1orf53Q5VUE5 145 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms