RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 CPP00450 1065 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 PABPC1P11940 636 aaKnown RBP6.22□□□□□ -1.41
SKP1-210ENST00000522855 HOXC12P31275 282 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 BMP8BP34820 402 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 NOP2P46087 812 aaKnown RBP6.22□□□□□ -1.41
SKP1-210ENST00000522855 PCBP3P57721 371 aaKnown RBP6.22□□□□□ -1.41
SKP1-210ENST00000522855 MESP2Q0VG99 397 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 RNF187Q5TA31 235 aaPredicted RBP6.22□□□□□ -1.41
SKP1-210ENST00000522855 CRTC3Q6UUV7 619 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 NSMFQ6X4W1 530 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 TMPRSS7Q7RTY8 843 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 KCTD13Q8WZ19 329 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 IER2Q9BTL4 223 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 DHRS4Q9BTZ2 278 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 DUSP15Q9H1R2 295 aaPredicted RBP6.22□□□□□ -1.41
SKP1-210ENST00000522855 LMCD1Q9NZU5 365 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.22□□□□□ -1.41
SKP1-210ENST00000522855 PLAAQ9Y263 795 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 MRPS23Q9Y3D9 190 aaKnown RBP6.22□□□□□ -1.41
SKP1-210ENST00000522855 PRKAB1Q9Y478 270 aa6.22□□□□□ -1.41
SKP1-210ENST00000522855 SSU72P8A0A1W2PR75 194 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 PRODHO43272 600 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 TBX1O43435 398 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 ASMTLO95671 621 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 CD3EP07766 207 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 SNRPB2P08579 225 aaKnown RBP6.21□□□□□ -1.42
SKP1-210ENST00000522855 TPP2P29144 1249 aaPredicted RBP6.21□□□□□ -1.42
SKP1-210ENST00000522855 LTKP29376 864 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 RBM10P98175 930 aaKnown RBP6.21□□□□□ -1.42
SKP1-210ENST00000522855 MAP4K2Q12851 820 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 ZSWIM9Q86XI8 627 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 CILP2Q8IUL8 1156 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 TCTN2Q96GX1 697 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 HSPA12BQ96MM6 686 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 LGR4Q9BXB1 951 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 ATP13A1Q9HD20 1204 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 CYP26B1Q9NR63 512 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 DUSP13Q9UII6 198 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 GPR55Q9Y2T6 319 aaPredicted RBP6.21□□□□□ -1.42
SKP1-210ENST00000522855 BACE2Q9Y5Z0 518 aa6.21□□□□□ -1.42
SKP1-210ENST00000522855 PPP1R12AO14974 1030 aaPredicted RBP6.2□□□□□ -1.42
SKP1-210ENST00000522855 APPP05067 770 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 SCG5P05408 212 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 CTSKP43235 329 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 KCNJ6P48051 423 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 GFRA1P56159 465 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 YOD1Q5VVQ6 348 aaPredicted RBP6.2□□□□□ -1.42
SKP1-210ENST00000522855 RNF111Q6ZNA4 994 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 KSR1Q8IVT5 923 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 LINC00116Q8NCU8 138 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 KISS1RQ969F8 398 aaPredicted RBP6.2□□□□□ -1.42
SKP1-210ENST00000522855 EXOC2Q96KP1 924 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 MRPL4Q9BYD3 311 aaKnown RBP6.2□□□□□ -1.42
SKP1-210ENST00000522855 CARS2Q9HA77 564 aaKnown RBP6.2□□□□□ -1.42
SKP1-210ENST00000522855 NCOA5Q9HCD5 579 aaKnown RBP6.2□□□□□ -1.42
SKP1-210ENST00000522855 ZSWIM5Q9P217 1185 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 MINPP1Q9UNW1 487 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
SKP1-210ENST00000522855 SBNO2Q9Y2G9 1366 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 STXBP3O00186 592 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 PLD2O14939 933 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 FARP2O94887 1054 aaPredicted RBP6.19□□□□□ -1.42
SKP1-210ENST00000522855 CAPNS1P04632 268 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 SYPP08247 313 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 L1CAMP32004 1257 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 GRIA2P42262 883 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 SEPHS1P49903 392 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 SCRN1Q12765 414 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 DPY19L1Q2PZI1 675 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 GAB4Q2WGN9 574 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 FAM209AQ5JX71 171 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 FYB2Q5VWT5 728 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 EEF1DP3Q658K8 133 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 UBE2FQ969M7 185 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 SFMBT1Q9UHJ3 866 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 TCFL5Q9UL49 500 aa6.19□□□□□ -1.42
SKP1-210ENST00000522855 TRBV23OR9-2A0A075B6M9 112 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 AURKAO14965 403 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 VAMP4O75379 141 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 ZNF205O95201 554 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 VAV1P15498 845 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 GABREP78334 506 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 ZNF124Q15973 351 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 TKFCQ3LXA3 575 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 FOXB2Q5VYV0 432 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 RCSD1Q6JBY9 416 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 OSBP2Q969R2 916 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
SKP1-210ENST00000522855 CD2APQ9Y5K6 639 aa6.18□□□□□ -1.42
SKP1-210ENST00000522855 C2orf71A6NGG8 1288 aa6.17□□□□□ -1.42
SKP1-210ENST00000522855 DLX3O60479 287 aa6.17□□□□□ -1.42
SKP1-210ENST00000522855 EFCAB14O75071 495 aa6.17□□□□□ -1.42
SKP1-210ENST00000522855 RFPL3O75679 317 aa6.17□□□□□ -1.42
SKP1-210ENST00000522855 ECI1P42126 302 aa6.17□□□□□ -1.42
SKP1-210ENST00000522855 KCNMB1Q16558 191 aa6.17□□□□□ -1.42
SKP1-210ENST00000522855 FNDC3BQ53EP0 1204 aaKnown RBP6.17□□□□□ -1.42
SKP1-210ENST00000522855 ACBD5Q5T8D3 534 aaPredicted RBP6.17□□□□□ -1.42
SKP1-210ENST00000522855 CYP2R1Q6VVX0 501 aa6.17□□□□□ -1.42
SKP1-210ENST00000522855 ZNF662Q6ZS27 426 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms