RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 NAA15Q9BXJ9 866 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 LZTFL1Q9NQ48 299 aa12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
RAB11FIP1-204ENST00000522774 H7C1D1 291 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 EDIL3O43854 480 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 TADA3O75528 432 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 FECHP22830 423 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ERVK-24P63145 666 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 AK8Q96MA6 479 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ABHD10Q9NUJ1 306 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ZNF446Q9NWS9 450 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ESYT2A0FGR8 921 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 H2AFXP16104 143 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 UBXN1Q04323 297 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 MNS1Q8NEH6 495 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 EEF2KMTQ96G04 330 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 TRIM9Q9C026 710 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 USP40Q9NVE5 1235 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 OGFRQ9NZT2 677 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 MYL1P05976 194 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 SNHG28P0DPA3 235 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 TTI2Q6NXR4 508 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 TMC4Q7Z404 712 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ACRBPQ8NEB7 543 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ANKRD20A12PQ8NF67 263 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 SRRTQ9BXP5 876 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
RAB11FIP1-204ENST00000522774 SLC37A4O43826 429 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SRGNP10124 158 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SHMT1P34896 483 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TXKP42681 527 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CCDC51Q96ER9 411 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CUEDC2Q9H467 287 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MRFAP1Q9Y605 127 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TDP2O95551 362 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ABL1P00519 1130 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 FCER1AP12319 257 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 STK4Q13043 487 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TTBK2Q6IQ55 1244 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CDC42EP5Q6NZY7 148 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KRT27Q7Z3Y8 459 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DUSP9Q99956 384 aaKnown RBP12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SERPINB13Q9UIV8 391 aa12.08□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PSMA7O14818 248 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TPM1P09493 284 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KRT9P35527 623 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ADCY7P51828 1080 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ASIC1P78348 528 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PDE4DQ08499 809 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 NFIAQ12857 509 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 UBXN4Q92575 508 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 EPC1Q9H2F5 836 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SUGT1Q9Y2Z0 365 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 LGALS16A8MUM7 142 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TTLL1O95922 423 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZNF543Q08ER8 600 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 GRB10Q13322 594 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 STIM1Q13586 685 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 UBE2SQ16763 222 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZFPM1Q8IX07 1006 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 HOMEZQ8IX15 550 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 THAP9Q9H5L6 903 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 MAGEF1Q9HAY2 307 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PES1O00541 588 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 SLC16A2P36021 539 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CLCN6P51797 869 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CALCRLQ16602 461 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 EXOC1Q9NV70 894 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TTC26A0AVF1 554 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 EFCAB8A8MWE9 144 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ZSCAN20P17040 1043 aaPredicted RBP12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 ATP2B2Q01814 1243 aa12.06□□□□□ -0.48
RAB11FIP1-204ENST00000522774 PPP2R3AQ06190 1150 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms