RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 CCDC174Q6PII3 467 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 KCTD1Q719H9 257 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 FAM126BQ8IXS8 530 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 SEZ6LQ9BYH1 1024 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 CYP39A1Q9NYL5 469 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 PRR12Q9ULL5 1215 aa10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 GNEQ9Y223 722 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-229ENST00000521683 SPTBN5Q9NRC6 3674 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 LOC102724159A0A0B4J2E5 919 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 RANBP6O60518 1105 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 NMT2O60551 498 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 ICAM1P05362 532 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 PDE1AP54750 535 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 TNFAIP2Q03169 654 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 PWP2Q15269 919 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 ANKRD45Q5TZF3 282 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 VPS53Q5VIR6 699 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 BTNL9Q6UXG8 535 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 TLK2Q86UE8 772 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 SLC43A3Q8NBI5 491 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 MAFAQ8NHW3 353 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 MORC4Q8TE76 937 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 RANBP17Q9H2T7 1088 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 VTA1Q9NP79 307 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 TCP11L1Q9NUJ3 509 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 CCPG1Q9ULG6 757 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 Q9Y3F1 56 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 ASTN1O14525 1302 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 EYSQ5T1H1 3165 aa10.51□□□□□ -0.73
CTNNA1-229ENST00000521683 LCTP09848 1927 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 ZEB2O60315 1214 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 CD4P01730 458 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 TOP1P11387 765 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 PCP11498 1178 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 DNAJB2P25686 324 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 CCDC96Q2M329 555 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 MCMDC2Q4G0Z9 681 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 MUM1L1Q5H9M0 696 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 RASIP1Q5U651 963 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 IQSEC1Q6DN90 963 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 PSRC1Q6PGN9 363 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 RASGRP2Q7LDG7 609 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 TMEM199Q8N511 208 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 MYLIPQ8WY64 445 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 VTI1AQ96AJ9 217 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.5□□□□□ -0.731e-7■■□□□ 11.9
CTNNA1-229ENST00000521683 INCENPQ9NQS7 918 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 PNMA2Q9UL42 364 aa10.5□□□□□ -0.73
CTNNA1-229ENST00000521683 A0A0D9SFI3 127 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 FGAP02671 866 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 HSPD1P10809 573 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 FOSL2P15408 326 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 SMPD1P17405 629 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 NT5C2P49902 561 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 BEX3Q00994 111 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 AAMPQ13685 434 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 FSCN1Q16658 493 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 TMEM240Q5SV17 173 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 SYDE2Q5VT97 1194 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 TAPT1Q6NXT6 567 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 NSMFQ6X4W1 530 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 NOL8Q76FK4 1167 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 FBXO16Q8IX29 292 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 FAM227BQ96M60 508 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 CRBNQ96SW2 442 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 COL25A1Q9BXS0 654 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 AP5M1Q9H0R1 490 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 PRUNE2Q8WUY3 3088 aa10.49□□□□□ -0.73
CTNNA1-229ENST00000521683 PDHBP11177 359 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 CSF2RAP15509 400 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 SNAP25P60880 206 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 ITGA7Q13683 1181 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 CXCL17Q6UXB2 119 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 C16orf59Q7L2K0 433 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 ZNF589Q86UQ0 364 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 CHMP4CQ96CF2 233 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 TIFAQ96CG3 184 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 TMEM47Q9BQJ4 181 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 PPP1R12CQ9BZL4 782 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 TOMM22Q9NS69 142 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 CCDC171Q6TFL3 1326 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 WDR19Q8NEZ3 1342 aa10.48□□□□□ -0.73
CTNNA1-229ENST00000521683 RBM47A0AV96 593 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 NFIBO00712 420 aa10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 DYNC1LI2O43237 492 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 SNHG28P0DPA3 235 aa10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 SLC16A2P36021 539 aa10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 ALDH5A1P51649 535 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 MFAP1P55081 439 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 ZNF543Q08ER8 600 aa10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 NMIQ13287 307 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 BAATQ14032 418 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 DUSP28Q4G0W2 176 aa10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 RRP12Q5JTH9 1297 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 AKNAD1Q5T1N1 836 aa10.47□□□□□ -0.73
CTNNA1-229ENST00000521683 TTBK2Q6IQ55 1244 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms