RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 TBC1D8O95759 1140 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 LIG1P18858 919 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 JMJD4Q9H9V9 463 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 CPA4Q9UI42 421 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 ADAMTS5Q9UNA0 930 aa25.34■■□□□ 1.65
PTP4A3-204ENST00000521578 TPRNQ4KMQ1 711 aa25.33■■□□□ 1.65
PTP4A3-204ENST00000521578 FBXO18Q8NFZ0 1043 aa25.33■■□□□ 1.65
PTP4A3-204ENST00000521578 C8orf76Q96K31 380 aa25.33■■□□□ 1.65
PTP4A3-204ENST00000521578 CTDP1Q9Y5B0 961 aaPredicted RBP25.33■■□□□ 1.65
PTP4A3-204ENST00000521578 COL11A1P12107 1806 aaPredicted RBP25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 TLR2O60603 784 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 ZBED4O75132 1171 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 CCDC174Q6PII3 467 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 LBX2Q6XYB7 198 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 ANKRD13CQ8N6S4 541 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 RIOX1Q9H6W3 641 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 SLC38A10Q9HBR0 1119 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 TXNRD2Q9NNW7 524 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 DDX19AQ9NUU7 478 aaKnown RBP25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 BTBD7Q9P203 1132 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 RBPJLQ9UBG7 517 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 GCLCP48506 637 aaPredicted RBP25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 FOSBP53539 338 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 HOMER1Q86YM7 354 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 CPXCR1Q8N123 301 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 RNF214Q8ND24 703 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 BEGAINQ9BUH8 593 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 SPZ1Q9BXG8 430 aa25.32■■□□□ 1.64
PTP4A3-204ENST00000521578 ADGRA2Q96PE1 1338 aa25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 hCG_1642624A0A1W2PR95 340 aa25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 FUT2Q10981 343 aa25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 TMEM132BQ14DG7 1078 aa25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 NTRK3Q16288 839 aa25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 MB21D1Q8N884 522 aa25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 PIGSQ96S52 555 aa25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 RANBP17Q9H2T7 1088 aaKnown RBP25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 RRAGDQ9NQL2 400 aaPredicted RBP25.31■■□□□ 1.64
PTP4A3-204ENST00000521578 CNMDO75829 334 aa25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 PLS1Q14651 629 aa25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 CDC37Q16543 378 aaPredicted RBP25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 REPS2Q8NFH8 660 aa25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 PHKBQ93100 1093 aa25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 NUP62CLQ9H1M0 184 aa25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 RAVER2Q9HCJ3 691 aaKnown RBP25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 RABGAP1Q9Y3P9 1069 aa25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 CNTNAP5Q8WYK1 1306 aa25.3■■□□□ 1.64
PTP4A3-204ENST00000521578 SMARCA1P28370 1054 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 GUCY1B3Q02153 619 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 HS1BP3Q53T59 392 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 GTF3C2Q8WUA4 911 aaPredicted RBP25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 WBP1LQ9NX94 342 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 A0A0G2JMZ2 1700 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 FDX1P10109 184 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 QRICH1Q2TAL8 776 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 C17orf99Q6UX52 265 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 USP28Q96RU2 1077 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 TSKSQ9UJT2 592 aa25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 V9GY48 417 aaPredicted RBP25.29■■□□□ 1.64
PTP4A3-204ENST00000521578 MYH6P13533 1939 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 BCRP11274 1271 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 IFNAR1P17181 557 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 ERVK-9P63128 1117 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 ERVK-24P63145 666 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 Q3C1V9 767 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 RBM43Q6ZSC3 357 aaKnown RBP25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 BRAPQ7Z569 592 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 MTMR8Q96EF0 704 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 RRP36Q96EU6 259 aaKnown RBP25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 CLSTN2Q9H4D0 955 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 DACT1Q9NYF0 836 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 RTEL1Q9NZ71 1219 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 ZNF214Q9UL59 606 aaPredicted RBP25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 ZNF536O15090 1300 aa25.28■■□□□ 1.64
PTP4A3-204ENST00000521578 TAL1P17542 331 aaPredicted RBP25.27■■□□□ 1.64
PTP4A3-204ENST00000521578 JMYQ8N9B5 988 aa25.27■■□□□ 1.64
PTP4A3-204ENST00000521578 GPRC5AQ8NFJ5 357 aa25.27■■□□□ 1.64
PTP4A3-204ENST00000521578 AGBL1Q96MI9 1066 aa25.27■■□□□ 1.64
PTP4A3-204ENST00000521578 CFHR5Q9BXR6 569 aa25.27■■□□□ 1.64
PTP4A3-204ENST00000521578 SLC26A6Q9BXS9 759 aa25.27■■□□□ 1.64
PTP4A3-204ENST00000521578 SAGE1Q9NXZ1 904 aa25.27■■□□□ 1.64
PTP4A3-204ENST00000521578 ZBTB5O15062 677 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 FAM110CQ1W6H9 321 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 SNRNP48Q6IEG0 339 aaKnown RBP25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 BICD2Q8TD16 824 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 SPATC1LQ9H0A9 340 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 MORF4L1Q9UBU8 362 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 SEC63Q9UGP8 760 aaKnown RBP25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 SMCHD1A6NHR9 2005 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 ESPNB1AK53 854 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 ECM2O94769 699 aaPredicted RBP25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 STAT3P40763 770 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 TEX13BQ9BXU2 312 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 STK36Q9NRP7 1315 aa25.26■■□□□ 1.63
PTP4A3-204ENST00000521578 PNMA6FA0A0J9YX94 578 aa25.25■■□□□ 1.63
PTP4A3-204ENST00000521578 ICAM1P05362 532 aa25.25■■□□□ 1.63
PTP4A3-204ENST00000521578 CCDC192P0DO97 292 aa25.25■■□□□ 1.63
PTP4A3-204ENST00000521578 USH1GQ495M9 461 aa25.25■■□□□ 1.63
PTP4A3-204ENST00000521578 CCPG1Q9ULG6 757 aa25.25■■□□□ 1.63
PTP4A3-204ENST00000521578 ATP2A1O14983 1001 aa25.24■■□□□ 1.63
PTP4A3-204ENST00000521578 PPP1R11O60927 126 aaPredicted RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms