RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SPAG1Q07617 926 aa12.75□□□□□ -0.37
CLK4-206ENST00000520878 RBL2Q08999 1139 aa12.75□□□□□ -0.37
CLK4-206ENST00000520878 MCM6Q14566 821 aa12.75□□□□□ -0.37
CLK4-206ENST00000520878 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
CLK4-206ENST00000520878 PCDHA12Q9UN75 941 aa12.75□□□□□ -0.37
CLK4-206ENST00000520878 CFBP00751 764 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 LRRC41Q15345 812 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
CLK4-206ENST00000520878 DDX25Q9UHL0 483 aaKnown RBP12.74□□□□□ -0.37
CLK4-206ENST00000520878 ARHGAP6O43182 974 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 KRT9P35527 623 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 UBXN2AP68543 259 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 PRR16Q569H4 304 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
CLK4-206ENST00000520878 E4F1Q66K89 784 aaPredicted RBP12.74□□□□□ -0.37
CLK4-206ENST00000520878 APOBEC3HQ6NTF7 200 aaKnown RBP12.74□□□□□ -0.37
CLK4-206ENST00000520878 UBXN4Q92575 508 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 CCDC17Q96LX7 622 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 KANSL2Q9H9L4 492 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 POLD4Q9HCU8 107 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 MYH7P12883 1935 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
CLK4-206ENST00000520878 EPS15P42566 896 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 SLC35G1Q2M3R5 365 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 MAP7D2Q96T17 732 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 ZMYND12Q9H0C1 365 aa12.74□□□□□ -0.37
CLK4-206ENST00000520878 CHMP2AO43633 222 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 HOXA13P31271 388 aaPredicted RBP12.73□□□□□ -0.37
CLK4-206ENST00000520878 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
CLK4-206ENST00000520878 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 TBC1D8BQ0IIM8 1120 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 ZNF658Q5TYW1 1059 aaPredicted RBP12.73□□□□□ -0.37
CLK4-206ENST00000520878 C15orf52Q6ZUT6 534 aaKnown RBP12.73□□□□□ -0.37
CLK4-206ENST00000520878 RGS22Q8NE09 1264 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
CLK4-206ENST00000520878 JMJD4Q9H9V9 463 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 TNFRSF25Q93038 417 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 SOWAHDA6NJG2 315 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 F5H6K3 240 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 CCDC175P0C221 793 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 KLRC3Q07444 240 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 KRT31Q15323 416 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 TEX35Q5T0J7 233 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 NCAPH2Q6IBW4 605 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 NELFCDQ8IXH7 590 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 MMRN2Q9H8L6 949 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 PPP2R2CQ9Y2T4 447 aa12.73□□□□□ -0.37
CLK4-206ENST00000520878 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■□□□□ 8.8
CLK4-206ENST00000520878 SLU7O95391 586 aaKnown RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 MTF1Q14872 753 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 QRICH1Q2TAL8 776 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 PRMT6Q96LA8 375 aaPredicted RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 DEF6Q9H4E7 631 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 MYO1BO43795 1136 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 KIF5CO60282 957 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 FCER1AP12319 257 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 SHMT1P34896 483 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 SARSP49591 514 aaKnown RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 CC2D2BQ6DHV5 1058 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 HHIPL2Q6UWX4 724 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 CCDC84Q86UT8 332 aaPredicted RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 GAKO14976 1311 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 MYH13Q9UKX3 1938 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 PPP1R3GB7ZBB8 358 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 ZBTB5O15062 677 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 CYP4A11Q02928 519 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 KIAA1328Q86T90 577 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 SLF1Q9BQI6 1058 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 NOC4LQ9BVI4 516 aaKnown RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 LUC7L2Q9Y383 392 aaKnown RBP12.72□□□□□ -0.37
CLK4-206ENST00000520878 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
CLK4-206ENST00000520878 MTERF4Q7Z6M4 381 aaKnown RBP12.71□□□□□ -0.37
CLK4-206ENST00000520878 FBXO11Q86XK2 927 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 TTLL6Q8N841 843 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 KIAA1024Q9UPX6 916 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 CICQ96RK0 1608 aaPredicted RBP12.71□□□□□ -0.37
CLK4-206ENST00000520878 CLSTN1O94985 981 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 ELF2Q15723 593 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 TOGARAM2Q6ZUX3 1019 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
CLK4-206ENST00000520878 PDGFDQ9GZP0 370 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms