RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ICAM1P05362 532 aa23.17■■□□□ 1.3
PABPC1-215ENST00000520804 HAND2P61296 217 aa23.17■■□□□ 1.3
PABPC1-215ENST00000520804 NKX3-2P78367 333 aa23.17■■□□□ 1.3
PABPC1-215ENST00000520804 GNASQ5JWF2 1037 aa23.17■■□□□ 1.3
PABPC1-215ENST00000520804 CHD1LQ86WJ1 897 aa23.17■■□□□ 1.3
PABPC1-215ENST00000520804 MROH7Q68CQ1 1323 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.16■■□□□ 1.3
PABPC1-215ENST00000520804 CTAGE5O15320 804 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 PCP11498 1178 aaKnown RBP23.16■■□□□ 1.3
PABPC1-215ENST00000520804 SDSP20132 328 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 SLC16A2P36021 539 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 CDK7P50613 346 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 EPHB4P54760 987 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 TNFAIP2Q03169 654 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 OSBPL3Q9H4L5 887 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 LRRC37A2A6NM11 1700 aa23.16■■□□□ 1.3
PABPC1-215ENST00000520804 FRMPD2Q68DX3 1309 aaPredicted RBP23.15■■□□□ 1.3
PABPC1-215ENST00000520804 IGHDP01880 384 aa23.15■■□□□ 1.3
PABPC1-215ENST00000520804 AKNAD1Q5T1N1 836 aa23.15■■□□□ 1.3
PABPC1-215ENST00000520804 ZNF697Q5TEC3 545 aa23.15■■□□□ 1.3
PABPC1-215ENST00000520804 SYDE2Q5VT97 1194 aa23.15■■□□□ 1.3
PABPC1-215ENST00000520804 MFSD6Q6ZSS7 791 aa23.15■■□□□ 1.3
PABPC1-215ENST00000520804 PLEKHM2Q8IWE5 1019 aa23.15■■□□□ 1.3
PABPC1-215ENST00000520804 GUCD1Q96NT3 240 aa23.15■■□□□ 1.3
PABPC1-215ENST00000520804 PDHBP11177 359 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 MFAP1P55081 439 aaKnown RBP23.14■■□□□ 1.29
PABPC1-215ENST00000520804 SMAD3P84022 425 aaKnown RBP23.14■■□□□ 1.29
PABPC1-215ENST00000520804 NUCB1Q02818 461 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 FPGSQ05932 587 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 NSMFQ6X4W1 530 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 TBC1D10CQ8IV04 446 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 VTI1AQ96AJ9 217 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 FAM161BQ96MY7 647 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 TTC14Q96N46 770 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 GPCPD1Q9NPB8 672 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 TBX21Q9UL17 535 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 GNEQ9Y223 722 aaKnown RBP23.14■■□□□ 1.29
PABPC1-215ENST00000520804 DDX49Q9Y6V7 483 aaKnown RBP23.14■■□□□ 1.29
PABPC1-215ENST00000520804 LCTP09848 1927 aa23.14■■□□□ 1.29
PABPC1-215ENST00000520804 LAMA2P24043 3122 aaKnown RBP23.13■■□□□ 1.29
PABPC1-215ENST00000520804 A0A0U1RQG5 324 aaPredicted RBP23.13■■□□□ 1.29
PABPC1-215ENST00000520804 ARVCFO00192 962 aa23.13■■□□□ 1.29
PABPC1-215ENST00000520804 TIMP1P01033 207 aa23.13■■□□□ 1.29
PABPC1-215ENST00000520804 BEX3Q00994 111 aa23.13■■□□□ 1.29
PABPC1-215ENST00000520804 NOL8Q76FK4 1167 aaKnown RBP23.13■■□□□ 1.29
PABPC1-215ENST00000520804 RNF41Q9H4P4 317 aaPredicted RBP23.13■■□□□ 1.29
PABPC1-215ENST00000520804 TAPT1Q6NXT6 567 aa23.12■■□□□ 1.29
PABPC1-215ENST00000520804 TLK2Q86UE8 772 aa23.12■■□□□ 1.29
PABPC1-215ENST00000520804 MORC4Q8TE76 937 aa23.12■■□□□ 1.29
PABPC1-215ENST00000520804 RNPC3Q96LT9 517 aaKnown RBP23.12■■□□□ 1.29
PABPC1-215ENST00000520804 PURBQ96QR8 312 aaKnown RBP23.12■■□□□ 1.29
PABPC1-215ENST00000520804 SMPD1P17405 629 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 ZNF543Q08ER8 600 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 BAATQ14032 418 aaPredicted RBP23.11■■□□□ 1.29
PABPC1-215ENST00000520804 IQSEC1Q6DN90 963 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 EEPD1Q7L9B9 569 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 FBXO16Q8IX29 292 aaPredicted RBP23.11■■□□□ 1.29
PABPC1-215ENST00000520804 FAM126BQ8IXS8 530 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 AP5M1Q9H0R1 490 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 VTA1Q9NP79 307 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 PDGFCQ9NRA1 345 aa23.11■■□□□ 1.29
PABPC1-215ENST00000520804 NFIBO00712 420 aa23.1■■□□□ 1.29
PABPC1-215ENST00000520804 ZNF213O14771 459 aa23.1■■□□□ 1.29
PABPC1-215ENST00000520804 SNHG28P0DPA3 235 aa23.1■■□□□ 1.29
PABPC1-215ENST00000520804 FSCN1Q16658 493 aaKnown RBP23.1■■□□□ 1.29
PABPC1-215ENST00000520804 MFSD5Q6N075 450 aa23.1■■□□□ 1.29
PABPC1-215ENST00000520804 ESR2Q92731 530 aa23.1■■□□□ 1.29
PABPC1-215ENST00000520804 ADD3Q9UEY8 706 aaKnown RBP23.1■■□□□ 1.29
PABPC1-215ENST00000520804 PNMA2Q9UL42 364 aa23.1■■□□□ 1.29
PABPC1-215ENST00000520804 Q9Y3F1 56 aa23.1■■□□□ 1.29
PABPC1-215ENST00000520804 NEDD4P46934 1319 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 DYNC1LI2O43237 492 aaPredicted RBP23.09■■□□□ 1.29
PABPC1-215ENST00000520804 CABYRO75952 493 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 PTGS1P23219 599 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 NT5C2P49902 561 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 CWC27Q6UX04 472 aaKnown RBP23.09■■□□□ 1.29
PABPC1-215ENST00000520804 CXCL17Q6UXB2 119 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 CLEC4DQ8WXI8 215 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 SEMA6BQ9H3T3 888 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 DIAPH3Q9NSV4 1193 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 LAMA4Q16363 1823 aa23.09■■□□□ 1.29
PABPC1-215ENST00000520804 LOC102724159A0A0B4J2E5 919 aa23.08■■□□□ 1.29
PABPC1-215ENST00000520804 DLL1O00548 723 aa23.08■■□□□ 1.29
PABPC1-215ENST00000520804 TLR3O15455 904 aaKnown RBP23.08■■□□□ 1.29
PABPC1-215ENST00000520804 ALDH5A1P51649 535 aaPredicted RBP23.08■■□□□ 1.29
PABPC1-215ENST00000520804 PWP2Q15269 919 aaKnown RBP23.08■■□□□ 1.29
PABPC1-215ENST00000520804 TMEM63BQ5T3F8 832 aa23.08■■□□□ 1.29
PABPC1-215ENST00000520804 DGKHQ86XP1 1220 aa23.08■■□□□ 1.29
PABPC1-215ENST00000520804 SLC43A3Q8NBI5 491 aa23.08■■□□□ 1.29
PABPC1-215ENST00000520804 ZKSCAN3Q9BRR0 538 aa23.08■■□□□ 1.29
PABPC1-215ENST00000520804 PTPDC1A2A3K4 754 aa23.07■■□□□ 1.28
PABPC1-215ENST00000520804 HIP1O00291 1037 aa23.07■■□□□ 1.28
PABPC1-215ENST00000520804 ZEB2O60315 1214 aa23.07■■□□□ 1.28
PABPC1-215ENST00000520804 CD4P01730 458 aa23.07■■□□□ 1.28
PABPC1-215ENST00000520804 SLC30A10Q6XR72 485 aa23.07■■□□□ 1.28
PABPC1-215ENST00000520804 KIAA1211Q6ZU35 1233 aa23.07■■□□□ 1.28
PABPC1-215ENST00000520804 CDX2Q99626 313 aaPredicted RBP23.07■■□□□ 1.28
PABPC1-215ENST00000520804 TTYH1Q9H313 450 aaPredicted RBP23.07■■□□□ 1.28
PABPC1-215ENST00000520804 WDR19Q8NEZ3 1342 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms