RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 CYP2C9P11712 490 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 CNTN2Q02246 1040 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 ICA1Q05084 483 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 G3BP1Q13283 466 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSMD1-209ENST00000520630 TCTN1Q2MV58 587 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 SLFNL1Q499Z3 407 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 CCDC158Q5M9N0 1113 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 DEFB128Q7Z7B8 93 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 CCDC144CPQ8IYA2 1237 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 RPUSD2Q8IZ73 545 aaKnown RBP9.66□□□□□ -0.86
CSMD1-209ENST00000520630 GDPD5Q8WTR4 605 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 PPP1R13LQ8WUF5 828 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 CCDC8Q9H0W5 538 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-209ENST00000520630 UBE2ZQ9H832 354 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-209ENST00000520630 ALG13Q9NP73 1137 aaKnown RBP9.66□□□□□ -0.86
CSMD1-209ENST00000520630 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 FAM186AA6NE01 2351 aa9.66□□□□□ -0.86
CSMD1-209ENST00000520630 PTPRZ1P23471 2315 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-209ENST00000520630 SOWAHBA6NEL2 793 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 GNAI3P08754 354 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 SMPD1P17405 629 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 LEXMQ3ZCV2 418 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 SNRNP48Q6IEG0 339 aaKnown RBP9.65□□□□□ -0.86
CSMD1-209ENST00000520630 HFE2Q6ZVN8 426 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 HERC6Q8IVU3 1022 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 LCORLQ8N3X6 602 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 UIMC1Q96RL1 719 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 ALDH8A1Q9H2A2 487 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-209ENST00000520630 SUGCTQ9HAC7 445 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 PDGFCQ9NRA1 345 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 TRMT13Q9NUP7 481 aaKnown RBP9.65□□□□□ -0.86
CSMD1-209ENST00000520630 PLXNA4Q9HCM2 1894 aa9.65□□□□□ -0.86
CSMD1-209ENST00000520630 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.86
CSMD1-209ENST00000520630 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 ATP2A1O14983 1001 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 PRKAB2O43741 272 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 CHGBP05060 677 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 MS4A1P11836 297 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 CDK8P49336 464 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 TNFAIP2Q03169 654 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 TAPT1Q6NXT6 567 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 TLK2Q86UE8 772 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 TMEM57Q8N5G2 664 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 FAM133AQ8N9E0 248 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 PRSS33Q8NF86 280 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 SSH3Q8TE77 659 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 DDX11Q96FC9 970 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 SLC9A7Q96T83 725 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 TEX13BQ9BXU2 312 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 API5Q9BZZ5 524 aaKnown RBP9.64□□□□□ -0.87
CSMD1-209ENST00000520630 KCNH6Q9H252 994 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 HDAC5Q9UQL6 1122 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 COG6Q9Y2V7 657 aa9.64□□□□□ -0.87
CSMD1-209ENST00000520630 MAGEB6P1A0A0J9YX57 407 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 C19orf67A6NJJ6 358 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 PDE6AP16499 860 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 COPB2P35606 906 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 FSCN1Q16658 493 aaKnown RBP9.63□□□□□ -0.87
CSMD1-209ENST00000520630 IER5LQ5T953 404 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 CERS3Q8IU89 383 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 PHOSPHO2Q8TCD6 241 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 NEK9Q8TD19 979 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 CTAGE1Q96RT6 745 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 SPC25Q9HBM1 224 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 PPP4R2Q9NY27 417 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 LMCD1Q9NZU5 365 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 SWAP70Q9UH65 585 aa9.63□□□□□ -0.87
CSMD1-209ENST00000520630 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-209ENST00000520630 CABYRO75952 493 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 PFKMP08237 780 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 IQCF3P0C7M6 154 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 ALADP13716 330 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 KCNA5P22460 613 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 DEFB103AP81534 67 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 C12orf60Q5U649 245 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 PTCRAQ6ISU1 281 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-209ENST00000520630 C16orf86Q6ZW13 317 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 CPXCR1Q8N123 301 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 SLF1Q9BQI6 1058 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 SLC38A10Q9HBR0 1119 aa9.62□□□□□ -0.87
CSMD1-209ENST00000520630 RAVER2Q9HCJ3 691 aaKnown RBP9.62□□□□□ -0.87
CSMD1-209ENST00000520630 NOP58Q9Y2X3 529 aaKnown RBP9.62□□□□□ -0.87
CSMD1-209ENST00000520630 ZNF536O15090 1300 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 TNKSO95271 1327 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 DCXO43602 365 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 NDUFB10O96000 172 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 GNAI2P04899 355 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 ERVK-21P61565 698 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 ATP8B2P98198 1209 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 ZP2Q05996 745 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 FTSJ3Q8IY81 847 aaKnown RBP9.61□□□□□ -0.87
CSMD1-209ENST00000520630 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSMD1-209ENST00000520630 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
CSMD1-209ENST00000520630 CRNKL1Q9BZJ0 848 aaKnown RBP9.61□□□□□ -0.87
CSMD1-209ENST00000520630 SH2D4AQ9H788 454 aa9.61□□□□□ -0.87
CSMD1-209ENST00000520630 ARMT1Q9H993 441 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms