RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 BRF1Q92994 677 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 SYTL4Q96C24 671 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 CCDC120Q96HB5 630 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 FGD4Q96M96 766 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 SUGT1Q9Y2Z0 365 aa5.02□□□□□ -1.61
HMGB1P41-201ENST00000520234 WASH4PA8MWX3 477 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 RBAK-RBAKDNI3L0D1 243 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 POU4F1Q01851 419 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 EGR3Q06889 387 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 SLC10A6Q3KNW5 377 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 SV2CQ496J9 727 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 SGSM3Q96HU1 749 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 DEPDC7Q96QD5 511 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 SLC26A8Q96RN1 970 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 LNPKQ9C0E8 428 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 NOL6Q9H6R4 1146 aaKnown RBP5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 LRP2BPQ9P2M1 347 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 CGGBP1Q9UFW8 167 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 TCFL5Q9UL49 500 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 AKT3Q9Y243 479 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 EMC9Q9Y3B6 208 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 PCDHA11Q9Y5I1 949 aa5.01□□□□□ -1.61
HMGB1P41-201ENST00000520234 MEIS1O00470 390 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 ZNF205O95201 554 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 SYPP08247 313 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 VAV1P15498 845 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 CTSKP43235 329 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 IFRD2Q12894 506 aaPredicted RBP5□□□□□ -1.61
HMGB1P41-201ENST00000520234 RASA3Q14644 834 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 CCDC144BQ3MJ40 725 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 DPH6Q7L8W6 267 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 ADCY4Q8NFM4 1077 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 ZDHHC15Q96MV8 337 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 SRPK1Q96SB4 655 aaKnown RBP5□□□□□ -1.61
HMGB1P41-201ENST00000520234 ZSWIM4Q9H7M6 989 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 CARS2Q9HA77 564 aaKnown RBP5□□□□□ -1.61
HMGB1P41-201ENST00000520234 SNTG2Q9NY99 539 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 APEX2Q9UBZ4 518 aa5□□□□□ -1.61
HMGB1P41-201ENST00000520234 H0Y8X5 98 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 AMPD2Q01433 879 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 TEKQ02763 1124 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 PPP2R5DQ14738 602 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 MTERF2Q49AM1 385 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 CRTC3Q6UUV7 619 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 TRIM59Q8IWR1 403 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 LRRC47Q8N1G4 583 aaKnown RBP4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 MARCH10Q8NA82 808 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 PPP1R14AQ96A00 147 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 MRFAP1L1Q96HT8 127 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 MRGPRX3Q96LB0 322 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 CCDC140Q96MF4 163 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 ALPK1Q96QP1 1244 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 FOXP3Q9BZS1 431 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 MINPP1Q9UNW1 487 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 CDK11AQ9UQ88 783 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 ZNF281Q9Y2X9 895 aa4.99□□□□□ -1.61
HMGB1P41-201ENST00000520234 FAM221BA6H8Z2 402 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 CCDC85CA6NKD9 419 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 ITGAVP06756 1048 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 RBM10P98175 930 aaKnown RBP4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 DUSP4Q13115 394 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 BMS1Q14692 1282 aaKnown RBP4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 ZNF227Q86WZ6 799 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 KCNN1Q92952 543 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 SLC12A9Q9BXP2 914 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 CYP26B1Q9NR63 512 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 ZMYM5Q9UJ78 669 aa4.98□□□□□ -1.61
HMGB1P41-201ENST00000520234 ADAMTS20P59510 1910 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 AURKAO14965 403 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 KCNH1O95259 989 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 CD3EP07766 207 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 RPL10P27635 214 aaKnown RBP4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 HSP90AA2PQ14568 343 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 LONRF2Q1L5Z9 754 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 SPATS1Q496A3 300 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 EEF1DP3Q658K8 133 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 GTF2IRD2BQ6EKJ0 949 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 RCSD1Q6JBY9 416 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 GTF2IRD2Q86UP8 949 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 FCRL3Q96P31 734 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 SPATA9Q9BWV2 254 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 NKX2-4Q9H2Z4 354 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 CWC22Q9HCG8 908 aaKnown RBP4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 SLAMF8Q9P0V8 285 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 TMEM59LQ9UK28 342 aa4.97□□□□□ -1.61
HMGB1P41-201ENST00000520234 A0A1W2PQU0 124 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 FKTNO75072 461 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 CAPNS1P04632 268 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 GSTM1P09488 218 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 HOXC12P31275 282 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 GDNFP39905 211 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 SSRP1Q08945 709 aaKnown RBP4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 ZC3H12BQ5HYM0 836 aaKnown RBP4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 RTP2Q5QGT7 225 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 CYP2R1Q6VVX0 501 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 WAPLQ7Z5K2 1190 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 NOP9Q86U38 636 aaKnown RBP4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 SPPL2CQ8IUH8 684 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 ANKS4BQ8N8V4 417 aa4.96□□□□□ -1.62
HMGB1P41-201ENST00000520234 LINC01599Q8WXQ3 324 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms