RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 ERCC5P28715 1186 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-211ENST00000519401 MXRA7P84157 204 aa12.62□□□□□ -0.39
SPIDR-211ENST00000519401 USP4Q13107 963 aa12.62□□□□□ -0.39
SPIDR-211ENST00000519401 PABPC1LQ4VXU2 614 aaKnown RBP12.62□□□□□ -0.39
SPIDR-211ENST00000519401 ZNF530Q6P9A1 599 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-211ENST00000519401 LCA5Q86VQ0 697 aa12.62□□□□□ -0.39
SPIDR-211ENST00000519401 GSPT2Q8IYD1 628 aaKnown RBP12.62□□□□□ -0.39
SPIDR-211ENST00000519401 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
SPIDR-211ENST00000519401 TSEN2Q8NCE0 465 aaKnown RBP12.62□□□□□ -0.39
SPIDR-211ENST00000519401 AGAP11Q8TF27 550 aa12.62□□□□□ -0.39
SPIDR-211ENST00000519401 RRP36Q96EU6 259 aaKnown RBP12.62□□□□□ -0.39
SPIDR-211ENST00000519401 AGAP3Q96P47 875 aa12.62□□□□□ -0.39
SPIDR-211ENST00000519401 ECHDC1Q9NTX5 307 aa12.62□□□□□ -0.39
SPIDR-211ENST00000519401 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-211ENST00000519401 CCT8L1PA6NM43 557 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 PRLRP16471 622 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 PABPC4Q13310 644 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 BYSLQ13895 437 aaKnown RBP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 NT5DC1Q5TFE4 455 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 LRIG3Q6UXM1 1119 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 LMNTD2Q8IXW0 634 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.393e-9■■■■■ 77.4
SPIDR-211ENST00000519401 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 NEK1Q96PY6 1258 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 SIL1Q9H173 461 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 G3BP2Q9UN86 482 aaKnown RBP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 DPPA5A6NC42 116 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 N4BP3O15049 544 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 PPP6R2O75170 966 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 WFS1O76024 890 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 KIF4AO95239 1232 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 SH3BGRP55822 239 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 PAK2Q13177 524 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 SH2D3CQ8N5H7 860 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 ACRBPQ8NEB7 543 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 PPP1R14BQ96C90 147 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 NAF1Q96HR8 494 aaKnown RBP12.61□□□□□ -0.39
SPIDR-211ENST00000519401 ATXN10Q9UBB4 475 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 SWAP70Q9UH65 585 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 ZNF510Q9Y2H8 683 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
SPIDR-211ENST00000519401 ZNF233A6NK53 670 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 ZMYND10O75800 440 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 FLOT1O75955 427 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 VAV2P52735 878 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 ITIH4Q14624 930 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 ANKRD20A2Q5SQ80 823 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 ANKRD20A1Q5TYW2 823 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 ANKRD20A3Q5VUR7 823 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 APTXQ7Z2E3 356 aaKnown RBP12.6□□□□□ -0.39
SPIDR-211ENST00000519401 CAGE1Q8TC20 777 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 C17orf50Q8WW18 174 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 MAIP1Q8WWC4 291 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 AGXT2Q9BYV1 514 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 DMAP1Q9NPF5 467 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-211ENST00000519401 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 STIM2Q9P246 746 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 SLC12A6Q9UHW9 1150 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 CEP131Q9UPN4 1083 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 LRRC42Q9Y546 428 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 NUB1Q9Y5A7 615 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 ATP1A1P05023 1023 aaKnown RBP12.6□□□□□ -0.39
SPIDR-211ENST00000519401 UBTFL1P0CB47 393 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-211ENST00000519401 BIRC3Q13489 604 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 MPRIPQ6WCQ1 1025 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 FAM114A1Q8IWE2 563 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
SPIDR-211ENST00000519401 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.39
SPIDR-211ENST00000519401 WDR37Q9Y2I8 494 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 CLIC4Q9Y696 253 aa12.6□□□□□ -0.39
SPIDR-211ENST00000519401 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 BAG3O95817 575 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 GSTA2P09210 222 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 ATP2A2P16615 1042 aaKnown RBP12.59□□□□□ -0.39
SPIDR-211ENST00000519401 DESP17661 470 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 YY1P25490 414 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 CASP14P31944 242 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 SLC39A14Q15043 492 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 ANO1Q5XXA6 986 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 ANKS4BQ8N8V4 417 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 PIGBQ92521 554 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 USP44Q9H0E7 712 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 LRRC4BQ9NT99 713 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 ADD3Q9UEY8 706 aaKnown RBP12.59□□□□□ -0.39
SPIDR-211ENST00000519401 CIDEBQ9UHD4 219 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 L3MBTL1Q9Y468 752 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 CARMIL3Q8ND23 1372 aa12.59□□□□□ -0.39
SPIDR-211ENST00000519401 KRT14P02533 472 aa12.58□□□□□ -0.39
SPIDR-211ENST00000519401 RPL13P26373 211 aaKnown RBP12.58□□□□□ -0.39
SPIDR-211ENST00000519401 KCNQ4P56696 695 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms