RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 TMPRSS13Q9BYE2 586 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 GBP3Q9H0R5 595 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 RNF208Q9H0X6 261 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 NCOA5Q9HCD5 579 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 CYP4F12Q9HCS2 524 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 DISC1Q9NRI5 854 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 PTCH1Q13635 1447 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 PPIP5K1Q6PFW1 1433 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 NKTRP30414 1462 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 DIP2AQ14689 1571 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 NRKQ7Z2Y5 1582 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 MON2Q7Z3U7 1717 aa6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-212ENST00000518919 C9IYK1 514 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 FYB1O15117 783 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 RNGTTO60942 597 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 CST3P01034 146 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 SOX5P35711 763 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 MTHFSP49914 203 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 SLFN5Q08AF3 891 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 COL9A3Q14050 684 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 HSP90AA2PQ14568 343 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 CBX2Q14781 532 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 ERBB4Q15303 1308 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 EDC4Q6P2E9 1401 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 ILDR2Q71H61 639 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 UBE3DQ7Z6J8 389 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 ZNF227Q86WZ6 799 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 THNSL2Q86YJ6 484 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 XRN1Q8IZH2 1706 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 SLC16A10Q8TF71 515 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 STAG1Q8WVM7 1258 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 ISL2Q96A47 359 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 MKRN2Q9H000 416 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 TYW1Q9NV66 732 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 TERF2IPQ9NYB0 399 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 SUSD2Q9UGT4 822 aa6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 MRPS23Q9Y3D9 190 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 CEP170BQ9Y4F5 1589 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-212ENST00000518919 PNPLA6Q8IY17 1366 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 TRBV23-1A0A0A0MS06 115 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 SPDYE3A6NKU9 549 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 DLL1O00548 723 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 PLD2O14939 933 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 CBFA2T2O43439 604 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 PDE8AO60658 829 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 RFPL3O75679 317 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 PDGFRBP09619 1106 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 CAP2P40123 477 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 STAT3P40763 770 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 DGKGP49619 791 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 PPP2R2AP63151 447 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 SLBPQ14493 270 aaKnown RBP eCLIP6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 FAM209AQ5JX71 171 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 AXDND1Q5T1B0 1012 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 YOD1Q5VVQ6 348 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 DYMQ7RTS9 669 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 HDGFL2Q7Z4V5 671 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 FBXO11Q86XK2 927 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 FMR1NBQ8N0W7 255 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 EXOC6Q8TAG9 804 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 XAGE3Q8WTP9 111 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 KISS1RQ969F8 398 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 FGD4Q96M96 766 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 DHRS4Q9BTZ2 278 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 CAAP1Q9H8G2 361 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 SUGCTQ9HAC7 445 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 SSU72Q9NP77 194 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 LRRC4BQ9NT99 713 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 APEX2Q9UBZ4 518 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 SUGT1Q9Y2Z0 365 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 AKAP12Q02952 1782 aa6.11□□□□□ -1.43
CTNNA1-212ENST00000518919 RIMS1Q86UR5 1692 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 LRRC7Q96NW7 1537 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 A0A0A0MRY4 1105 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 MEGF11A6BM72 1044 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 PLIN1O60240 522 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 PARNO95453 639 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 ITGAVP06756 1048 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 SUMO1P63165 101 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 SOX4Q06945 474 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 FNDC3BQ53EP0 1204 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 FDX2Q6P4F2 183 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 KIAA1211Q6ZU35 1233 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 FERMT3Q86UX7 667 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 NGEFQ8N5V2 710 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 PRPF38AQ8NAV1 312 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 SMG8Q8ND04 991 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 LRRN4CLQ8ND94 238 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 IRF7Q92985 503 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 RUNDC1Q96C34 613 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 CFAP53Q96M91 514 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 CEP89Q96ST8 783 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 CHMP4AQ9BY43 222 aa6.1□□□□□ -1.43
CTNNA1-212ENST00000518919 MRPL4Q9BYD3 311 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms