RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C16orf86Q6ZW13 317 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 WFDC3Q8IUB2 231 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 KSR1Q8IVT5 923 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 FCRL2Q96LA5 508 aaPredicted RBP6.61□□□□□ -1.35
SQLE-202ENST00000518604 ALPK1Q96QP1 1244 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 CDADC1Q9BWV3 514 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 PAK6Q9NQU5 681 aaPredicted RBP6.61□□□□□ -1.35
SQLE-202ENST00000518604 FANCLQ9NW38 375 aa6.61□□□□□ -1.35
SQLE-202ENST00000518604 ESYT3A0FGR9 886 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 FKTNO75072 461 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 CDC45O75419 566 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 CD96P40200 585 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 ECI1P42126 302 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 TCEA2Q15560 299 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 PLEKHG4Q58EX7 1191 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 FAM209AQ5JX71 171 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 SLC35F1Q5T1Q4 408 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 WAPLQ7Z5K2 1190 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 EXOC2Q96KP1 924 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 KANSL2Q9H9L4 492 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 AP5S1Q9NUS5 200 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 TNFRSF10DQ9UBN6 386 aa6.6□□□□□ -1.35
SQLE-202ENST00000518604 MRPS23Q9Y3D9 190 aaKnown RBP6.6□□□□□ -1.35
SQLE-202ENST00000518604 HYAL3O43820 417 aaPredicted RBP6.59□□□□□ -1.35
SQLE-202ENST00000518604 THBDP07204 575 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 PAMP19021 973 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 KIR2DL1P43626 348 aaPredicted RBP6.59□□□□□ -1.35
SQLE-202ENST00000518604 KIR2DL2P43627 348 aaPredicted RBP6.59□□□□□ -1.35
SQLE-202ENST00000518604 CYP4F3Q08477 520 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 SF1Q15637 639 aaKnown RBP6.59□□□□□ -1.35
SQLE-202ENST00000518604 YOD1Q5VVQ6 348 aaPredicted RBP6.59□□□□□ -1.35
SQLE-202ENST00000518604 FOXB2Q5VYV0 432 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 HLA-DQA1Q5Y7H0 255 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 RSPO2Q6UXX9 243 aaPredicted RBP6.59□□□□□ -1.35
SQLE-202ENST00000518604 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.35
SQLE-202ENST00000518604 NFXL1Q6ZNB6 911 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 NAT16Q8N8M0 369 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 KREMEN2Q8NCW0 462 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 NPLOC4Q8TAT6 608 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 PI4K2BQ8TCG2 481 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 LINC01599Q8WXQ3 324 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 C1orf159Q96HA4 380 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 PTCHD1Q96NR3 888 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 MMP19Q99542 508 aa6.59□□□□□ -1.35
SQLE-202ENST00000518604 L1CAMP32004 1257 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 GABREP78334 506 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 CHRNEQ04844 493 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 TAF7LQ5H9L4 462 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 EGFLAMQ63HQ2 1017 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 KIAA0907Q7Z7F0 614 aaPredicted RBP6.58□□□□□ -1.36
SQLE-202ENST00000518604 SPPL2CQ8IUH8 684 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 TP53INP2Q8IXH6 220 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 ANKS4BQ8N8V4 417 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 FRS2Q8WU20 508 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 DCAF4Q8WV16 495 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 MAP6Q96JE9 813 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 KRTAP4-12Q9BQ66 201 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 MRPL4Q9BYD3 311 aaKnown RBP6.58□□□□□ -1.36
SQLE-202ENST00000518604 TMX1Q9H3N1 280 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 ERVK13-1Q9NX77 482 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 SLAMF8Q9P0V8 285 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 TMEM59LQ9UK28 342 aa6.58□□□□□ -1.36
SQLE-202ENST00000518604 NPHP3-ACAD11A0A0J9YXS1 232 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 A0A1W2PQ45 241 aaPredicted RBP6.57□□□□□ -1.36
SQLE-202ENST00000518604 A0A1W2PQY0 241 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 PLD2O14939 933 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 MEFVO15553 781 aaPredicted RBP6.57□□□□□ -1.36
SQLE-202ENST00000518604 RFPL3O75679 317 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 ZGLP1P0C6A0 271 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 KCNAB2Q13303 367 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 FNDC3BQ53EP0 1204 aaKnown RBP6.57□□□□□ -1.36
SQLE-202ENST00000518604 ARTNQ5T4W7 220 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 MAMDC2Q7Z304 686 aaPredicted RBP6.57□□□□□ -1.36
SQLE-202ENST00000518604 OXR1Q8N573 874 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 PDZD8Q8NEN9 1154 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 PTPRN2Q92932 1015 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 FEZ1Q99689 392 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 ZFYVE21Q9BQ24 234 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 G6PC3Q9BUM1 346 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 ADAMTS10Q9H324 1103 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 GPRC5CQ9NQ84 441 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 NPFFR2Q9Y5X5 522 aa6.57□□□□□ -1.36
SQLE-202ENST00000518604 FADS2P1A8MWK0 482 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 KCNQ2O43526 872 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 EFCAB14O75071 495 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 ASMTLO95671 621 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 PLS3P13797 630 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 LTBRP36941 435 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 GDNFP39905 211 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 PLCL1Q15111 1095 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 TRIM61Q5EBN2 209 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 PPIL6Q8IXY8 311 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 TMEM52Q8NDY8 209 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 DIO2Q92813 273 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 NCOA5Q9HCD5 579 aaKnown RBP6.56□□□□□ -1.36
SQLE-202ENST00000518604 GPR27Q9NS67 375 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 CLEC1BQ9P126 229 aa6.56□□□□□ -1.36
SQLE-202ENST00000518604 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms