RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 B4GALT4O60513 344 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 SUPT20HL2P0C7V6 817 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 KCNQ1P51787 676 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 PUS7LQ9H0K6 701 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 HOMER2Q9NSB8 354 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 COG6Q9Y2V7 657 aa13.68□□□□□ -0.22
TRAPPC9-203ENST00000517667 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 IGKV6D-41A0A0C4DH26 115 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 TTLL1O95922 423 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 ACTN1P12814 892 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 MYOGP15173 224 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 STAT2P52630 851 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 IQSEC1Q6DN90 963 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 SLC9A7Q96T83 725 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 A1CFQ9NQ94 594 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 MTCH2Q9Y6C9 303 aa13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 PRRC2BQ5JSZ5 2229 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-203ENST00000517667 MINDY4BA8MYZ0 360 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 CA3P07451 260 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 BMP3P12645 472 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 SMPD1P17405 629 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 RFC2P35250 354 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 TMEM31Q5JXX7 168 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 ZNF444Q8N0Y2 327 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 CEP95Q96GE4 821 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 SCLYQ96I15 445 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 AGBL1Q96MI9 1066 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 STRBPQ96SI9 672 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 LRFN3Q9BTN0 628 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 BCL11AQ9H165 835 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 RNF146Q9NTX7 359 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 MTMR4Q9NYA4 1195 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 PLIN4Q96Q06 1357 aa13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-203ENST00000517667 LCTP09848 1927 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 SCN5AQ14524 2016 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 CHGBP05060 677 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 PSMC6P62333 389 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 SLFN13Q68D06 897 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 FAM160B2Q86V87 743 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 PHOSPHO2Q8TCD6 241 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 CHURC1Q8WUH1 139 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.22
TRAPPC9-203ENST00000517667 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 TMEM232C9JQI7 657 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 MS4A1P11836 297 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 GNAT2P19087 354 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 TDO2P48775 406 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 IKQ13123 557 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 TTLL4Q14679 1199 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 TAPT1Q6NXT6 567 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 FBXO16Q8IX29 292 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 LRRC47Q8N1G4 583 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 HLA-CQ95604 372 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 TRERF1Q96PN7 1200 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 ZNF536O15090 1300 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 TNKSO95271 1327 aa13.64□□□□□ -0.23
TRAPPC9-203ENST00000517667 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 GPR37L1O60883 481 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 TSPY3P0CV98 308 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 TSPY8P0CW00 308 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 ALAS1P13196 640 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 CPT1AP50416 773 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 DUSP28Q4G0W2 176 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 STAG1Q8WVM7 1258 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 VWCEQ96DN2 955 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 GMCL1Q96IK5 515 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 EPHX3Q9H6B9 360 aa13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 TRMT13Q9NUP7 481 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-203ENST00000517667 SCN10AQ9Y5Y9 1956 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 LOC102724159A0A0B4J2E5 919 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 RFXAPO00287 272 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 TLL1O43897 1013 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 PLA2G6O60733 806 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 PRDM1O75626 825 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 SLC1A4P43007 532 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 PURAQ00577 322 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 PDE4BQ07343 736 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 PWP2Q15269 919 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 KIAA1211Q6ZU35 1233 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 EEPD1Q7L9B9 569 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 MORC4Q8TE76 937 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 ARNTL2Q8WYA1 636 aa13.62□□□□□ -0.23
TRAPPC9-203ENST00000517667 APPBP2Q92624 585 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms