RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 L1TD1Q5T7N2 865 aaKnown RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SCARA3Q6AZY7 606 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GTF2IRD2BQ6EKJ0 949 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DENND5AQ6IQ26 1287 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GDF6Q6KF10 455 aaPredicted RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MRPL14Q6P1L8 145 aaKnown RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LVRNQ6Q4G3 990 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZNF598Q86UK7 904 aaKnown RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GTF2IRD2Q86UP8 949 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FAM35AQ86V20 835 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MICALL1Q8N3F8 863 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TTC17Q96AE7 1141 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TMEM87BQ96K49 555 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DHRS1Q96LJ7 313 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MYD88Q99836 296 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CORO1BQ9BR76 489 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NUCKS1Q9H1E3 243 aaKnown RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MS4A5Q9H3V2 200 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SMOC1Q9H4F8 434 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CYP26B1Q9NR63 512 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NDFIP2Q9NV92 336 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MKS1Q9NXB0 559 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TOR4AQ9NXH8 423 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NAGPAQ9UK23 515 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ADAM30Q9UKF2 790 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 HIF3AQ9Y2N7 669 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 COQ6Q9Y2Z9 468 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PCDHGB6Q9Y5F9 930 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DGKBQ9Y6T7 804 aa3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SOS2Q07890 1332 aaPredicted RBP3.33□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SHOXO15266 292 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TIMM44O43615 452 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GDF9O60383 454 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CTNND1O60716 968 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 VAMP4O75379 141 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPM1BO75688 479 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RHOBTB3O94955 611 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SRGAP2CP0DJJ0 459 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RBP3P10745 1247 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 BMP1P13497 986 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 HSPA6P17066 643 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RHCEP18577 417 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CD247P20963 164 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TNFAIP3P21580 790 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LSSP48449 732 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FXR1P51114 621 aaKnown RBP eCLIP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GTF2A2P52657 109 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 AK2P54819 239 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SCAND1P57086 179 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GJA9P57773 515 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GUCY1A3Q02108 690 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RHDQ02161 417 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CYP4F3Q08477 520 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LRRC32Q14392 662 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPP2R5DQ14738 602 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ACAP2Q15057 778 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TOMM20Q15388 145 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CLUL1Q15846 466 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NKG7Q16617 165 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCDC174Q6PII3 467 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 IGF2-ASQ6U949 168 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MAMDC2Q7Z304 686 aaPredicted RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 UBE3DQ7Z6J8 389 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CATIPQ7Z7H3 387 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DDX53Q86TM3 631 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MTDHQ86UE4 582 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FCHSD1Q86WN1 690 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MCATQ8IVS2 390 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SUGP1Q8IWZ8 645 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZBTB34Q8NCN2 500 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NGDNQ8NEJ9 315 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPP1R35Q8TAP8 253 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC35G2Q8TBE7 412 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DDX54Q8TDD1 881 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KCTD13Q8WZ19 329 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DIO2Q92813 273 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 C1orf159Q96HA4 380 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MPP4Q96JB8 637 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 AIFM3Q96NN9 605 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TAAR9Q96RI9 348 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 EIF2AK1Q9BQI3 630 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ORAI3Q9BRQ5 295 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CRB3Q9BUF7 120 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 APOL5Q9BWW9 433 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NRSN2Q9GZP1 204 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 WNT10AQ9GZT5 417 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MKRN2Q9H000 416 aaKnown RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GBP3Q9H0R5 595 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RSAD1Q9HA92 442 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GP6Q9HCN6 339 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NMRK2Q9NPI5 230 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CGGBP1Q9UFW8 167 aaPredicted RBP3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DNMT3LQ9UJW3 386 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PDZRN3Q9UPQ7 1066 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 WASHC2AQ641Q2 1341 aa3.32□□□□□ -1.88
SCARNA11.3-201ENST00000517276 hCG_1642624A0A1W2PR95 340 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LCHNA4D1U4 455 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 B4E1Z4 1266 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 hCG_1984214I3L0E3 225 aa3.31□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TPP1O14773 563 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms