RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 C16orf46Q6P387 395 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 PAQR3Q6TCH7 311 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 MAMDC4Q6UXC1 1216 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 NPNTQ6UXI9 565 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 SLCO6A1Q86UG4 719 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 STK32CQ86UX6 486 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 KRT78Q8N1N4 520 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 ADAMTS15Q8TE58 950 aa0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 FOXD3Q9UJU5 478 aaPredicted RBP0.64□□□□□ -2.31
RNU6-542P-201ENST00000516405 COL4A3Q01955 1670 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 F8W031 263 aaPredicted RBP0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 APBB1O00213 710 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 SRGAP3O43295 1099 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 KRT86O43790 486 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 PHACTR2O75167 634 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 NTN1O95631 604 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 CST3P01034 146 aaPredicted RBP0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 BMP8BP34820 402 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 PTH2RP49190 550 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 FOXG1P55316 489 aaPredicted RBP0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 HILS1P60008 231 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 POU4F1Q01851 419 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZNF252P-AS1Q0IIN9 211 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 DPYDQ12882 1025 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 KRT81Q14533 505 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 RNF111Q6ZNA4 994 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 CAPN12Q6ZSI9 719 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 ERICH6Q7L0X2 663 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 FAM98AQ8NCA5 519 aaKnown RBP0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 DNAJB8Q8NHS0 232 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 CPA5Q8WXQ8 436 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 ALG3Q92685 438 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 EAF1Q96JC9 268 aaPredicted RBP0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 KREMEN1Q96MU8 473 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 FOXP3Q9BZS1 431 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 IMPACTQ9P2X3 320 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 TNFRSF10DQ9UBN6 386 aa0.63□□□□□ -2.31
RNU6-542P-201ENST00000516405 AZU1P20160 251 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 MT3P25713 68 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 HNRNPUQ00839 825 aaKnown RBP eCLIP0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 PCOLCEQ15113 449 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 WASHC4Q2M389 1173 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 C8orf34Q49A92 452 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 LRP10Q7Z4F1 713 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 MRGPREQ86SM8 312 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 USP48Q86UV5 1035 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 RBMXL3Q8N7X1 1067 aaKnown RBP0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 ADAMTS19Q8TE59 1207 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 DDRGK1Q96HY6 314 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 YTHDC1Q96MU7 727 aaKnown RBP0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 RSAD1Q9HA92 442 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 TMEFF2Q9UIK5 374 aaPredicted RBP0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 AMOTL2Q9Y2J4 779 aa0.62□□□□□ -2.31
RNU6-542P-201ENST00000516405 GRID2IPA4D2P6 1211 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 CGB1A6NKQ9 187 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 SUSD5O60279 629 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 FKTNO75072 461 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 CYP1A1P04798 512 aaPredicted RBP0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 C8BP07358 591 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZNF28P17035 718 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 DNAJA1P31689 397 aaKnown RBP0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 ETV3P41162 512 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 SSBP2P81877 361 aaPredicted RBP0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 SLC25A3Q00325 362 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 PTPN12Q05209 780 aaKnown RBP0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 INPP5AQ14642 412 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 BBS9Q3SYG4 887 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 LCE3EQ5T5B0 92 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 HEATR6Q6AI08 1181 aaKnown RBP0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 TAX1BP1Q86VP1 789 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 TMPRSS12Q86WS5 348 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 KYQ8NBH2 561 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 GIMAP8Q8ND71 665 aaPredicted RBP0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 EDEM1Q92611 657 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 ACSBG1Q96GR2 724 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 LRRC37BQ96QE4 947 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 JMJD8Q96S16 334 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 WWOXQ9NZC7 414 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZNF70Q9UC06 446 aaPredicted RBP0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 TCFL5Q9UL49 500 aa0.61□□□□□ -2.31
RNU6-542P-201ENST00000516405 A0A1W2PQ45 241 aaPredicted RBP0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 A0A1W2PQY0 241 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 PRAMEF27A3QJZ7 478 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 RBMXL2O75526 392 aaKnown RBP0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 RPS6KA4O75676 772 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 PEX11BO96011 259 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 PDGFAP04085 211 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 RPLP1P05386 114 aaKnown RBP0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 IGKV2-30P06310 120 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 ARNTP27540 789 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 RPS26P11Q5JNZ5 115 aaPredicted RBP0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 SULF2Q8IWU5 870 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 SPEM1Q8N4L4 309 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 ZNF808Q8N4W9 903 aaPredicted RBP0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 TMEM52Q8NDY8 209 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 FCRL2Q96LA5 508 aaPredicted RBP0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 LMF1Q96S06 567 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 DPH2Q9BQC3 489 aaPredicted RBP0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 KRTAP4-1Q9BYQ7 146 aa0.6□□□□□ -2.31
RNU6-542P-201ENST00000516405 WNT10AQ9GZT5 417 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms