RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 FOXD4L3Q6VB84 417 aaPredicted RBP3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SYT9Q86SS6 491 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 HID1Q8IV36 788 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MCATQ8IVS2 390 aaKnown RBP3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TRIM22Q8IYM9 498 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SPICE1Q8N0Z3 855 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 GSTCDQ8NEC7 633 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MYRIPQ8NFW9 859 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PJA1Q8NG27 643 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SLC7A14Q8TBB6 771 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PANK1Q8TE04 598 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TRIM63Q969Q1 353 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 OSBP2Q969R2 916 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TMEM87BQ96K49 555 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 FGD4Q96M96 766 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SCLT1Q96NL6 688 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ELAC2Q9BQ52 826 aaKnown RBP3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 RHOBTB2Q9BYZ6 727 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SLC13A1Q9BZW2 595 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 KLHL25Q9H0H3 589 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TMX4Q9H1E5 349 aaPredicted RBP3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZHX3Q9H4I2 956 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CCDC86Q9H6F5 360 aaKnown RBP3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PPCSQ9HAB8 311 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TCF7L1Q9HCS4 588 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MAN1C1Q9NR34 630 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SH2B1Q9NRF2 756 aaPredicted RBP3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ENAMQ9NRM1 1142 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SLC6A14Q9UN76 642 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TRIM33Q9UPN9 1127 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 LAS1LQ9Y4W2 734 aaKnown RBP3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZMYM4Q5VZL5 1548 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 IGF1RP08069 1367 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TMEM94Q12767 1356 aa3.37□□□□□ -1.87
SCARNA17.1-201ENST00000516211 BLMP54132 1417 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CARMIL2Q6F5E8 1435 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SCAPERQ9BY12 1400 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SHANK3Q9BYB0 1731 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TCRBV16S1A1N1A0A5B0 115 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 NEMP1O14524 444 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TCEA3O75764 348 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 RGS9O75916 674 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 APBA3O96018 575 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 FGAP02671 866 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SNRPB2P08579 225 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 PF4V1P10720 104 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 BMP4P12644 408 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 POLR2BP30876 1174 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 HOXC12P31275 282 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 HTR3AP46098 478 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 LSSP48449 732 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ERVK-24P63145 666 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 GRB10Q13322 594 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZNF460Q14592 562 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SEPT7Q16181 437 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ABCB5Q2M3G0 1257 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 KIF4BQ2VIQ3 1234 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 NBPF9Q3BBW0 867 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TMEM95Q3KNT9 176 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ANKRD39Q53RE8 183 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 COBLL1Q53SF7 1204 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 INO80DQ53TQ3 878 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TMEM240Q5SV17 173 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 L1TD1Q5T7N2 865 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 NBPF12Q5TAG4 269 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZNF468Q5VIY5 522 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 IL31Q6EBC2 164 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CLEC4GQ6UXB4 293 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MPRIPQ6WCQ1 1025 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 LHFPL2Q6ZUX7 228 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MTDHQ86UE4 582 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MORC1Q86VD1 984 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 C12orf40Q86WS4 652 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZNF354CQ86Y25 554 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TRIM59Q8IWR1 403 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 MRPL41Q8IXM3 137 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 AMOTL1Q8IY63 956 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ANKRD42Q8N9B4 389 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TEX19Q8NA77 164 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 COG1Q8WTW3 980 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 DCAF4Q8WV16 495 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TTC9Q92623 222 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ACSF2Q96CM8 615 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 AHCYL2Q96HN2 611 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 FUBP3Q96I24 572 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 RCC1LQ96I51 464 aaKnown RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 ZNF512BQ96KM6 892 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 NUP88Q99567 741 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SELENOOQ9BVL4 669 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 USP26Q9BXU7 913 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CASS4Q9NQ75 786 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 CHST12Q9NRB3 414 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 NDFIP2Q9NV92 336 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SAMD15Q9P1V8 674 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 APEX2Q9UBZ4 518 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 TAGLN3Q9UI15 199 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 GDF2Q9UK05 429 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 FBXO9Q9UK97 447 aaPredicted RBP3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 DAAM1Q9Y4D1 1078 aa3.36□□□□□ -1.87
SCARNA17.1-201ENST00000516211 SPATA31A6Q5VVP1 1343 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms