RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 PRPF38AQ8NAV1 312 aaKnown RBP8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ENGASEQ8NFI3 743 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TBCKQ8TEA7 893 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CLIC6Q96NY7 704 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SLF1Q9BQI6 1058 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TANGO6Q9C0B7 1094 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 EMILIN3Q9NT22 766 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 FBXO28Q9NVF7 368 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TMEM260Q9NX78 707 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 FAM13BQ9NYF5 915 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CSADQ9Y600 493 aa8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 COL11A1P12107 1806 aaPredicted RBP8.7□□□□□ -1.02
SCARNA20.1-201ENST00000516009 FAM237AA0A1B0GTK4 181 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 FSD2A1L4K1 749 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 POTECB2RU33 542 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 LAD1O00515 517 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 VCAM1P19320 739 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 DEKP35659 375 aaKnown RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SYKP43405 635 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ORC2Q13416 577 aaPredicted RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SNW1Q13573 536 aaKnown RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 VGLL4Q14135 290 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TTLL12Q14166 644 aaPredicted RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CAMK4Q16566 473 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 UBE2SQ16763 222 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 LETM2Q2VYF4 491 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 L1TD1Q5T7N2 865 aaKnown RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ARL6IP4Q66PJ3 421 aaKnown RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CCDC174Q6PII3 467 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 DLK2Q6UY11 383 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 C12orf42Q96LP6 360 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TSPY26PQ9H489 355 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 RPAP3Q9H6T3 665 aaPredicted RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TMOD4Q9NZQ9 345 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 HPSEQ9Y251 543 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CTDP1Q9Y5B0 961 aaPredicted RBP8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 MRVI1Q9Y6F6 885 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 RLFQ13129 1914 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ABCB11O95342 1321 aa8.69□□□□□ -1.02
SCARNA20.1-201ENST00000516009 LOC285556D6RIA3 1793 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 VWA3AA6NCI4 1184 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 DCAF8L1A6NGE4 600 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L15C9J2P7 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L13C9JLJ4 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L11C9JVI0 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L18D6R9N7 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L22D6RA61 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L17D6RBQ6 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L19D6RCP7 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L20D6RJB6 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 NEMFO60524 1076 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CCNT1O60563 726 aaKnown RBP8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 FLOT1O75955 427 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ZNF202O95125 648 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 FOSP01100 380 aaPredicted RBP8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ICAM1P05362 532 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 FDX1P10109 184 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 HMGCS2P54868 508 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 GRIN1Q05586 938 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L24Q0WX57 530 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 DGKZQ13574 1117 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SPECC1Q5M775 1068 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 USP17L6PQ6QN14 398 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 GAS2L3Q86XJ1 694 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ANKRD13AQ8IZ07 590 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TIGD1Q96MW7 591 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 NAP1L4Q99733 375 aaKnown RBP8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SDF4Q9BRK5 362 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ANO3Q9BYT9 981 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CSRNP2Q9H175 543 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 PNMA2Q9UL42 364 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 KCNH3Q9ULD8 1083 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 PPP1R9AQ9ULJ8 1098 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 MRPL11Q9Y3B7 192 aaKnown RBP8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SPDYE3A6NKU9 549 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 PIK3CDO00329 1044 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 MEIS2O14770 477 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ZBED4O75132 1171 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 OR52Z1P0C646 297 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CCDC192P0DO97 292 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 GCFC2P16383 781 aaKnown RBP8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 TAL1P17542 331 aaPredicted RBP8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 PRPHP41219 470 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 MRE11P49959 708 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 SASS6Q6UVJ0 657 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 DTHD1Q6ZMT9 781 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 ARMC9Q7Z3E5 817 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 LDHDQ86WU2 507 aa8.67□□□□□ -1.02
SCARNA20.1-201ENST00000516009 CKAP2LQ8IYA6 745 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms