RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 GALNT18Q6P9A2 607 aa5.65□□□□□ -1.5
MATR3-226ENST00000515833 CCDC84Q86UT8 332 aaPredicted RBP5.65□□□□□ -1.5
MATR3-226ENST00000515833 ZNF655Q8N720 491 aaPredicted RBP5.65□□□□□ -1.5
MATR3-226ENST00000515833 LINC00116Q8NCU8 138 aa5.65□□□□□ -1.5
MATR3-226ENST00000515833 ZNF296Q8WUU4 475 aaPredicted RBP5.65□□□□□ -1.5
MATR3-226ENST00000515833 EAF1Q96JC9 268 aaPredicted RBP5.65□□□□□ -1.5
MATR3-226ENST00000515833 TMEM74Q96NL1 305 aa5.65□□□□□ -1.5
MATR3-226ENST00000515833 SRPK1Q96SB4 655 aaKnown RBP5.65□□□□□ -1.5
MATR3-226ENST00000515833 TRIM55Q9BYV6 548 aa5.65□□□□□ -1.5
MATR3-226ENST00000515833 GINM1Q9NU53 330 aa5.65□□□□□ -1.5
MATR3-226ENST00000515833 SIRPGQ9P1W8 387 aa5.65□□□□□ -1.5
MATR3-226ENST00000515833 PRR36Q9H6K5 1346 aa5.65□□□□□ -1.51
MATR3-226ENST00000515833 NUDT19A8MXV4 375 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 U2SURPO15042 1029 aaKnown RBP5.64□□□□□ -1.51
MATR3-226ENST00000515833 F13A1P00488 732 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 RLBP1P12271 317 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 ARL4AP40617 200 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 SNW1Q13573 536 aaKnown RBP5.64□□□□□ -1.51
MATR3-226ENST00000515833 ZFYVE27Q5T4F4 411 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 CPLX3Q8WVH0 158 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 PSMD1Q99460 953 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 TNFRSF10DQ9UBN6 386 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 TAF6LQ9Y6J9 622 aa5.64□□□□□ -1.51
MATR3-226ENST00000515833 WTIPA6NIX2 430 aaPredicted RBP5.63□□□□□ -1.51
MATR3-226ENST00000515833 K7ESM1 405 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 HTR3BO95264 441 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 PRKCAP17252 672 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 LIMS1P48059 325 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 ANAPC15P60006 121 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 TMEM62Q0P6H9 643 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 LAPTM5Q13571 262 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 UBXN11Q5T124 520 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 MICAL1Q8TDZ2 1067 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 HNRNPLLQ8WVV9 542 aaKnown RBP5.63□□□□□ -1.51
MATR3-226ENST00000515833 GATAD2BQ8WXI9 593 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 STRIP2Q9ULQ0 834 aa5.63□□□□□ -1.51
MATR3-226ENST00000515833 GPR55Q9Y2T6 319 aaPredicted RBP5.63□□□□□ -1.51
MATR3-226ENST00000515833 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
MATR3-226ENST00000515833 R3HCC1Q9Y3T6 440 aaKnown RBP5.63□□□□□ -1.51
MATR3-226ENST00000515833 ENPP3O14638 875 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 RGS13O14921 159 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 KLF4O43474 513 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 AKAP8O43823 692 aaKnown RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 UBOX5O94941 541 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 IGFBP6P24592 240 aaPredicted RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 CYP4F8P98187 520 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 FAM160A1Q05DH4 1040 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 CAMK2GQ13555 558 aaPredicted RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 RAB33AQ14088 237 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 CBX2Q14781 532 aaPredicted RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 NBPF9Q3BBW0 867 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 FBXL19Q6PCT2 694 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 NOL8Q76FK4 1167 aaKnown RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 FERMT3Q86UX7 667 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 ADGRG2Q8IZP9 1017 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 ZCRB1Q8TBF4 217 aaKnown RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 ANAPC16Q96DE5 110 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 FCRL2Q96LA5 508 aaPredicted RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 RNPC3Q96LT9 517 aaKnown RBP5.62□□□□□ -1.51
MATR3-226ENST00000515833 NT5C1AQ9BXI3 368 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 TNFRSF12AQ9NP84 129 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 SNTG2Q9NY99 539 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 MINPP1Q9UNW1 487 aa5.62□□□□□ -1.51
MATR3-226ENST00000515833 A0A1B0GTL3 188 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 PLEKHD1A6NEE1 506 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 PRAMEF1O95521 474 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 PF4P02776 101 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 SOX9P48436 509 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 RNF4P78317 190 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 CAP1Q01518 475 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 LMNB2Q03252 620 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 COL9A2Q14055 689 aaPredicted RBP5.61□□□□□ -1.51
MATR3-226ENST00000515833 RPTNQ6XPR3 784 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 FILIP1Q7Z7B0 1213 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 DEPDC7Q96QD5 511 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 BRINP2Q9C0B6 783 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 BCCIPQ9P287 314 aaKnown RBP eCLIP5.61□□□□□ -1.51
MATR3-226ENST00000515833 PALD1Q9ULE6 856 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 NOP58Q9Y2X3 529 aaKnown RBP5.61□□□□□ -1.51
MATR3-226ENST00000515833 IRS2Q9Y4H2 1338 aa5.61□□□□□ -1.51
MATR3-226ENST00000515833 SUPT16HQ9Y5B9 1047 aaKnown RBP5.61□□□□□ -1.51
MATR3-226ENST00000515833 FAM221BA6H8Z2 402 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 CCDC85CA6NKD9 419 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 CEBPAP49715 358 aaPredicted RBP5.6□□□□□ -1.51
MATR3-226ENST00000515833 ZNF827Q17R98 1081 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 NBPF12Q5TAG4 269 aaPredicted RBP5.6□□□□□ -1.51
MATR3-226ENST00000515833 SLCO6A1Q86UG4 719 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 LSRQ86X29 649 aaPredicted RBP5.6□□□□□ -1.51
MATR3-226ENST00000515833 NUP43Q8NFH3 380 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 NKD1Q969G9 470 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 RHOVQ96L33 236 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 IFT57Q9NWB7 429 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 UBP1Q9NZI7 540 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 ACSL6Q9UKU0 697 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 CNOT11Q9UKZ1 510 aaKnown RBP5.6□□□□□ -1.51
MATR3-226ENST00000515833 COL4A3BPQ9Y5P4 624 aa5.6□□□□□ -1.51
MATR3-226ENST00000515833 GREM1O60565 184 aa5.59□□□□□ -1.51
MATR3-226ENST00000515833 GARTP22102 1010 aa5.59□□□□□ -1.51
MATR3-226ENST00000515833 ZXDAP98168 799 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms