RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	ZRSR1	Q15695	479 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	ZNF174	Q15697	407 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	KANK3	Q6NY19	840 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	SAMD7	Q7Z3H4	446 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	NEK8	Q86SG6	692 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	FAM160B2	Q86V87	743 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	CKAP2L	Q8IYA6	745 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	FAM200A	Q8TCP9	573 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	VCPKMT	Q9H867	229 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	KCNH3	Q9ULD8	1083 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	PHIP	Q8WWQ0	1821 aa		13.6	□□□□□ -0.23
LMNA-224	ENST00000515711	PAPPA2	Q9BXP8	1791 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	EGFR	P00533	1210 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	MCM7	P33993	719 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	SLC16A2	P36021	539 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	JAG1	P78504	1218 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	PTGDR	Q13258	359 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	QRICH1	Q2TAL8	776 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	CHURC1	Q8WUH1	139 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	CLIC6	Q96NY7	704 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	AMN	Q9BXJ7	453 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	ZNF341	Q9BYN7	854 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	DEFB129	Q9H1M3	183 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	ANO10	Q9NW15	660 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	MRVI1	Q9Y6F6	885 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711	SCN4A	P35499	1836 aa		13.59	□□□□□ -0.23
LMNA-224	ENST00000515711		A0A1W2PRG0	241 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	PHF20L1	A8MW92	1017 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	TMEM232	C9JQI7	657 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	LONP1	P36776	959 aa	Known RBP	13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	TXLNA	P40222	546 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	CLK2	P49760	499 aa	Known RBP	13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	AP3B2	Q13367	1082 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	INF2	Q27J81	1249 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	NOM1	Q5C9Z4	860 aa	Known RBP	13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	MIGA2	Q7L4E1	593 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	FBXO11	Q86XK2	927 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	CDAN1	Q8IWY9	1227 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	CNNM3	Q8NE01	707 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	RASGRP4	Q8TDF6	673 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	LPAR1	Q92633	364 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	COA7	Q96BR5	231 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	FEZ1	Q99689	392 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	CSRNP2	Q9H175	543 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	KIAA1468	Q9P260	1216 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	FEM1B	Q9UK73	627 aa		13.58	□□□□□ -0.24
LMNA-224	ENST00000515711	WDR46	O15213	610 aa	Known RBP	13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	PPP1R11	O60927	126 aa	Predicted RBP	13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	GCFC2	P16383	781 aa	Known RBP	13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	EPHX2	P34913	555 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	ECE1	P42892	770 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	USP14	P54578	494 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	ANGEL2	Q5VTE6	544 aa	Known RBP	13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	KRBA2	Q6ZNG9	492 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	PANK2	Q9BZ23	570 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	NAT10	Q9H0A0	1025 aa	Known RBP	13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	PSTPIP2	Q9H939	334 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	AS3MT	Q9HBK9	375 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	ADARB2	Q9NS39	739 aa	Known RBP	13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	GGA3	Q9NZ52	723 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	PNMA2	Q9UL42	364 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	PCDHA1	Q9Y5I3	950 aa		13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	POLR2A	P24928	1970 aa	Known RBP	13.57	□□□□□ -0.24
LMNA-224	ENST00000515711	OTOF	Q9HC10	1997 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	WNT7A	O00755	349 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	NEMF	O60524	1076 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	OR52Z1	P0C646	297 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	ANO6	Q4KMQ2	910 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	CEP57L1	Q8IYX8	460 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	SCYL3	Q8IZE3	742 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	RNF214	Q8ND24	703 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	TRPM4	Q8TD43	1214 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	ACER1	Q8TDN7	264 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	TBCK	Q8TEA7	893 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	AK8	Q96MA6	479 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	NUP88	Q99567	741 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	KIAA1683	Q9H0B3	1180 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	RANBP17	Q9H2T7	1088 aa	Known RBP	13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	BIN2	Q9UBW5	565 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	ZNF112	Q9UJU3	913 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	PRR12	Q9ULL5	1215 aa		13.56	□□□□□ -0.24
LMNA-224	ENST00000515711	CASP8AP2	Q9UKL3	1982 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	VWA3A	A6NCI4	1184 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	ADAMTS3	O15072	1205 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	CCNT1	O60563	726 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	FOS	P01100	380 aa	Predicted RBP	13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	LETM2	Q2VYF4	491 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	SUPT20HL1	Q3ZLR7	823 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	FAM83B	Q5T0W9	1011 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	JAKMIP3	Q5VZ66	844 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	DTHD1	Q6ZMT9	781 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	C4orf32	Q8N8J7	132 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	SYMPK	Q92797	1274 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	PPP1R9B	Q96SB3	815 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	TUBE1	Q9UJT0	475 aa		13.55	□□□□□ -0.24
LMNA-224	ENST00000515711	POLR2D	O15514	142 aa	Known RBP	13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	ZNF165	P49910	485 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	GRIN1	Q05586	938 aa		13.54	□□□□□ -0.24
LMNA-224	ENST00000515711	PPP4R3A	Q6IN85	833 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms