RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TAB3Q8N5C8 712 aaPredicted RBP6.79□□□□□ -1.32
LINC01088-211ENST00000515597 LINC01356Q8N9X3 169 aa6.79□□□□□ -1.32
LINC01088-211ENST00000515597 DBHP09172 617 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 IMPDH2P12268 514 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 IFNGR1P15260 489 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 IGFBP6P24592 240 aaPredicted RBP6.78□□□□□ -1.32
LINC01088-211ENST00000515597 TACR1P25103 407 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 SKOR2Q2VWA4 1001 aaPredicted RBP6.78□□□□□ -1.32
LINC01088-211ENST00000515597 UNC5AQ6ZN44 842 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 TP53I13Q8NBR0 393 aaPredicted RBP6.78□□□□□ -1.32
LINC01088-211ENST00000515597 CXorf38Q8TB03 319 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 SMARCC1Q92922 1105 aaPredicted RBP6.78□□□□□ -1.32
LINC01088-211ENST00000515597 ZDHHC15Q96MV8 337 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 TM9SF2Q99805 663 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 NOL6Q9H6R4 1146 aaKnown RBP6.78□□□□□ -1.32
LINC01088-211ENST00000515597 ZNF451Q9Y4E5 1061 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 FHOD1Q9Y613 1164 aa6.78□□□□□ -1.32
LINC01088-211ENST00000515597 CD3EP07766 207 aa6.77□□□□□ -1.33
LINC01088-211ENST00000515597 TRIM26Q12899 539 aaPredicted RBP6.77□□□□□ -1.33
LINC01088-211ENST00000515597 NR1I3Q14994 352 aa6.77□□□□□ -1.33
LINC01088-211ENST00000515597 BICRALQ6AI39 1079 aa6.77□□□□□ -1.33
LINC01088-211ENST00000515597 CYP2R1Q6VVX0 501 aa6.77□□□□□ -1.33
LINC01088-211ENST00000515597 FCRL3Q96P31 734 aaPredicted RBP6.77□□□□□ -1.33
LINC01088-211ENST00000515597 SRRTQ9BXP5 876 aaKnown RBP6.77□□□□□ -1.33
LINC01088-211ENST00000515597 IRS2Q9Y4H2 1338 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 A0A1W2PQJ5 194 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 FFAR3O14843 346 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 CD247P20963 164 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 GUCY2CP25092 1073 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 CCDC81Q6ZN84 652 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 LSRQ86X29 649 aaPredicted RBP6.76□□□□□ -1.33
LINC01088-211ENST00000515597 RNF34Q969K3 372 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 PTCHD1Q96NR3 888 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 LUC7LQ9NQ29 371 aaKnown RBP6.76□□□□□ -1.33
LINC01088-211ENST00000515597 PDLIM7Q9NR12 457 aa6.76□□□□□ -1.33
LINC01088-211ENST00000515597 SRGAP3O43295 1099 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 CYBBP04839 570 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 ITGA4P13612 1032 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 PFKLP17858 780 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 FBLN1P23142 703 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 PPP2R5DQ14738 602 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 PAQR3Q6TCH7 311 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 ADGRG2Q8IZP9 1017 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 JAG2Q9Y219 1238 aa6.75□□□□□ -1.33
LINC01088-211ENST00000515597 SCAMP3O14828 347 aaKnown RBP6.74□□□□□ -1.33
LINC01088-211ENST00000515597 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
LINC01088-211ENST00000515597 CELA3BP08861 270 aa6.74□□□□□ -1.33
LINC01088-211ENST00000515597 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
LINC01088-211ENST00000515597 PRRT2Q7Z6L0 340 aaPredicted RBP6.74□□□□□ -1.33
LINC01088-211ENST00000515597 ADCY4Q8NFM4 1077 aa6.74□□□□□ -1.33
LINC01088-211ENST00000515597 RXFP1Q9HBX9 757 aa6.74□□□□□ -1.33
LINC01088-211ENST00000515597 ZNF214Q9UL59 606 aaPredicted RBP6.74□□□□□ -1.33
LINC01088-211ENST00000515597 SF3B6Q9Y3B4 125 aaKnown RBP6.74□□□□□ -1.33
LINC01088-211ENST00000515597 LTBP3Q9NS15 1303 aa6.74□□□□□ -1.33
LINC01088-211ENST00000515597 A0A1B0GTL3 188 aa6.73□□□□□ -1.33
LINC01088-211ENST00000515597 ZC3H12DA2A288 527 aaKnown RBP6.73□□□□□ -1.33
LINC01088-211ENST00000515597 F8W031 263 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-211ENST00000515597 CBFA2T2O43439 604 aa6.73□□□□□ -1.33
LINC01088-211ENST00000515597 ATF2P15336 505 aa6.73□□□□□ -1.33
LINC01088-211ENST00000515597 MC3RP41968 323 aa6.73□□□□□ -1.33
LINC01088-211ENST00000515597 RACK1P63244 317 aaKnown RBP6.73□□□□□ -1.33
LINC01088-211ENST00000515597 PRR5P85299 388 aa6.73□□□□□ -1.33
LINC01088-211ENST00000515597 TARBP2Q15633 366 aaKnown RBP6.73□□□□□ -1.33
LINC01088-211ENST00000515597 RBBP8NLQ8NC74 664 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-211ENST00000515597 TEPSINQ96N21 525 aa6.73□□□□□ -1.33
LINC01088-211ENST00000515597 MCMBPQ9BTE3 642 aa6.73□□□□□ -1.33
LINC01088-211ENST00000515597 DDX41Q9UJV9 622 aaKnown RBP6.73□□□□□ -1.33
LINC01088-211ENST00000515597 STXBP3O00186 592 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 L1CAMP32004 1257 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 SLURP1P55000 103 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 POU4F1Q01851 419 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 VWA3BQ502W6 1294 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 METTL16Q86W50 562 aaKnown RBP6.72□□□□□ -1.33
LINC01088-211ENST00000515597 HAUS7Q99871 368 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 BCAS3Q9H6U6 928 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
LINC01088-211ENST00000515597 DBR1Q9UK59 544 aaKnown RBP6.72□□□□□ -1.33
LINC01088-211ENST00000515597 TBC1D8O95759 1140 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 KCNC1P48547 511 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 CORO7P57737 925 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 FOXO4P98177 505 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 TCEAL1Q15170 157 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 FRMD5Q7Z6J6 570 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 NLGN1Q8N2Q7 840 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 FNIP1Q8TF40 1166 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 MRRFQ96E11 262 aaKnown RBP6.71□□□□□ -1.34
LINC01088-211ENST00000515597 BDH2Q9BUT1 245 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 GINM1Q9NU53 330 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 FBLN5Q9UBX5 448 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 PCDHB10Q9UN67 800 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 FAN1Q9Y2M0 1017 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 PMF1-BGLAPU3KQ54 211 aa6.71□□□□□ -1.34
LINC01088-211ENST00000515597 PRICKLE3O43900 615 aaPredicted RBP6.7□□□□□ -1.34
LINC01088-211ENST00000515597 NFKB2Q00653 900 aa6.7□□□□□ -1.34
LINC01088-211ENST00000515597 DPY19L1Q2PZI1 675 aa6.7□□□□□ -1.34
LINC01088-211ENST00000515597 ERICH6BQ5W0A0 696 aa6.7□□□□□ -1.34
LINC01088-211ENST00000515597 ALG3Q92685 438 aa6.7□□□□□ -1.34
LINC01088-211ENST00000515597 SPATA25Q9BR10 227 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms