RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 RASGRP2Q7LDG7 609 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 SLC43A3Q8NBI5 491 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 VTI1AQ96AJ9 217 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 PRR12Q9ULL5 1215 aa21.79■■□□□ 1.08
SPOP-220ENST00000515508 TLR3O15455 904 aaKnown RBP21.78■■□□□ 1.08
SPOP-220ENST00000515508 CD4P01730 458 aa21.78■■□□□ 1.08
SPOP-220ENST00000515508 BEX3Q00994 111 aa21.78■■□□□ 1.08
SPOP-220ENST00000515508 TMEM240Q5SV17 173 aa21.78■■□□□ 1.08
SPOP-220ENST00000515508 TLK2Q86UE8 772 aa21.78■■□□□ 1.08
SPOP-220ENST00000515508 TMEM199Q8N511 208 aa21.78■■□□□ 1.08
SPOP-220ENST00000515508 INCENPQ9NQS7 918 aa21.78■■□□□ 1.08
SPOP-220ENST00000515508 CYP39A1Q9NYL5 469 aa21.78■■□□□ 1.08
SPOP-220ENST00000515508 ORC4O43929 436 aa21.77■■□□□ 1.08
SPOP-220ENST00000515508 CABYRO75952 493 aa21.77■■□□□ 1.08
SPOP-220ENST00000515508 FGRP09769 529 aa21.77■■□□□ 1.08
SPOP-220ENST00000515508 CSF2RAP15509 400 aa21.77■■□□□ 1.08
SPOP-220ENST00000515508 GRIN2CQ14957 1233 aa21.77■■□□□ 1.08
SPOP-220ENST00000515508 MUM1L1Q5H9M0 696 aa21.77■■□□□ 1.08
SPOP-220ENST00000515508 VPS53Q5VIR6 699 aa21.77■■□□□ 1.08
SPOP-220ENST00000515508 PSRC1Q6PGN9 363 aaPredicted RBP21.77■■□□□ 1.08
SPOP-220ENST00000515508 SMPD1P17405 629 aa21.76■■□□□ 1.07
SPOP-220ENST00000515508 FSCN1Q16658 493 aaKnown RBP21.76■■□□□ 1.07
SPOP-220ENST00000515508 CXCL17Q6UXB2 119 aa21.76■■□□□ 1.07
SPOP-220ENST00000515508 MORC4Q8TE76 937 aa21.76■■□□□ 1.07
SPOP-220ENST00000515508 CHMP4CQ96CF2 233 aa21.76■■□□□ 1.07
SPOP-220ENST00000515508 TIFAQ96CG3 184 aa21.76■■□□□ 1.07
SPOP-220ENST00000515508 PPP1R12CQ9BZL4 782 aa21.76■■□□□ 1.07
SPOP-220ENST00000515508 ZNF576Q9H609 170 aa21.76■■□□□ 1.07
SPOP-220ENST00000515508 RANBP6O60518 1105 aaKnown RBP21.75■■□□□ 1.07
SPOP-220ENST00000515508 ICAM1P05362 532 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 SNAP25P60880 206 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 ALX1Q15699 326 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 TAPT1Q6NXT6 567 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 NOL8Q76FK4 1167 aaKnown RBP21.75■■□□□ 1.07
SPOP-220ENST00000515508 DCAF4Q8WV16 495 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 EVI5LQ96CN4 794 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 SEZ6LQ9BYH1 1024 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 RANBP17Q9H2T7 1088 aaKnown RBP21.75■■□□□ 1.07
SPOP-220ENST00000515508 CCPG1Q9ULG6 757 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 Q9Y3F1 56 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 DDX49Q9Y6V7 483 aaKnown RBP21.75■■□□□ 1.07
SPOP-220ENST00000515508 TTC28Q96AY4 2481 aa21.75■■□□□ 1.07
SPOP-220ENST00000515508 IQSEC1Q6DN90 963 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 BTNL9Q6UXG8 535 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 FBXO16Q8IX29 292 aaPredicted RBP21.74■■□□□ 1.07
SPOP-220ENST00000515508 PBX4Q9BYU1 374 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 VTA1Q9NP79 307 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 PDGFCQ9NRA1 345 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 HELLSQ9NRZ9 838 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 GBF1Q92538 1859 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 GRIN2DO15399 1336 aa21.74■■□□□ 1.07
SPOP-220ENST00000515508 MUC3AQ02505 3323 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 PTGS1P23219 599 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 ITGA7Q13683 1181 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 CCDC96Q2M329 555 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 NSMFQ6X4W1 530 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 ZNF365Q70YC5 407 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 AP5M1Q9H0R1 490 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 IL23AQ9NPF7 189 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 ZMYM6O95789 1325 aa21.73■■□□□ 1.07
SPOP-220ENST00000515508 LOC102724159A0A0B4J2E5 919 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 DYNC1LI2O43237 492 aaPredicted RBP21.72■■□□□ 1.07
SPOP-220ENST00000515508 ZEB2O60315 1214 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 ACRP10323 421 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 CYP2C18P33260 490 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 PBX2P40425 430 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 PWP2Q15269 919 aaKnown RBP21.72■■□□□ 1.07
SPOP-220ENST00000515508 EEPD1Q7L9B9 569 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 TICAM2Q86XR7 235 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 HIPK3Q9H422 1215 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 CHD7Q9P2D1 2997 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 MTMR7Q9Y216 660 aa21.72■■□□□ 1.07
SPOP-220ENST00000515508 GRXCR1A8MXD5 290 aa21.71■■□□□ 1.07
SPOP-220ENST00000515508 PDE1AP54750 535 aa21.71■■□□□ 1.07
SPOP-220ENST00000515508 TMEM63BQ5T3F8 832 aa21.71■■□□□ 1.07
SPOP-220ENST00000515508 USP38Q8NB14 1042 aa21.71■■□□□ 1.07
SPOP-220ENST00000515508 HERVK_113Q902F9 699 aa21.71■■□□□ 1.07
SPOP-220ENST00000515508 PURBQ96QR8 312 aaKnown RBP21.71■■□□□ 1.07
SPOP-220ENST00000515508 TCP11L1Q9NUJ3 509 aa21.71■■□□□ 1.07
SPOP-220ENST00000515508 UMODL1Q5DID0 1318 aa21.71■■□□□ 1.07
SPOP-220ENST00000515508 A0A0D9SFI3 127 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 FGAP02671 866 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 TOP1P11387 765 aaKnown RBP21.7■■□□□ 1.06
SPOP-220ENST00000515508 SLC16A2P36021 539 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 ALDH5A1P51649 535 aaPredicted RBP21.7■■□□□ 1.06
SPOP-220ENST00000515508 RRP1P56182 461 aaKnown RBP21.7■■□□□ 1.06
SPOP-220ENST00000515508 DUSP28Q4G0W2 176 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 ANKRD45Q5TZF3 282 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 SYDE2Q5VT97 1194 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 TTBK2Q6IQ55 1244 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 TMEM47Q9BQJ4 181 aa21.7■■□□□ 1.06
SPOP-220ENST00000515508 NOC4LQ9BVI4 516 aaKnown RBP21.7■■□□□ 1.06
SPOP-220ENST00000515508 ADD3Q9UEY8 706 aaKnown RBP21.7■■□□□ 1.06
SPOP-220ENST00000515508 ZBTB47Q9UFB7 747 aaPredicted RBP21.7■■□□□ 1.06
SPOP-220ENST00000515508 NFIBO00712 420 aa21.69■■□□□ 1.06
SPOP-220ENST00000515508 B4GALT4O60513 344 aa21.69■■□□□ 1.06
SPOP-220ENST00000515508 BAATQ14032 418 aaPredicted RBP21.69■■□□□ 1.06
SPOP-220ENST00000515508 KIAA1211Q6ZU35 1233 aa21.69■■□□□ 1.06
SPOP-220ENST00000515508 FAM227BQ96M60 508 aa21.69■■□□□ 1.06
SPOP-220ENST00000515508 WNT8AQ9H1J5 351 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms