RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 hCG_1984214I3L0E3 225 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 LARGE1O95461 756 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 PDCP20941 246 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 COPB2P35606 906 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 STAT3P40763 770 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 FUT2Q10981 343 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 PLS1Q14651 629 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 KIF22Q14807 665 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 ARHGEF6Q15052 776 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 CDC37Q16543 378 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-214ENST00000513989 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 HABP4Q5JVS0 413 aaKnown RBP11.71□□□□□ -0.53
NEDD9-214ENST00000513989 CCDC174Q6PII3 467 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 NBPF11Q86T75 865 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 CPXCR1Q8N123 301 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 FAM177A1Q8N128 213 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-214ENST00000513989 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-214ENST00000513989 PHKBQ93100 1093 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 ATG4CQ96DT6 458 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 MTMR8Q96EF0 704 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 DDX11Q96FC9 970 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 PIGSQ96S52 555 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 TMEM106CQ9BVX2 250 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 GLT8D2Q9H1C3 349 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
NEDD9-214ENST00000513989 MRPL11Q9Y3B7 192 aaKnown RBP11.71□□□□□ -0.53
NEDD9-214ENST00000513989 STK36Q9NRP7 1315 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 PTPDC1A2A3K4 754 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 SPDYE16A6NNV3 312 aaPredicted RBP11.7□□□□□ -0.54
NEDD9-214ENST00000513989 ATP2A1O14983 1001 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 CYTH3O43739 400 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 SLC25A27O95847 323 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 ICAM1P05362 532 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 SCG2P13521 617 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 PRMT2P55345 433 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 PRKCZQ05513 592 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
NEDD9-214ENST00000513989 RASGRP2Q7LDG7 609 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 NSUN7Q8NE18 718 aaKnown RBP11.7□□□□□ -0.54
NEDD9-214ENST00000513989 SMARCC2Q8TAQ2 1214 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 TEX13BQ9BXU2 312 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 CCPG1Q9ULG6 757 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 GABRQQ9UN88 632 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 PCDHA1Q9Y5I3 950 aa11.7□□□□□ -0.54
NEDD9-214ENST00000513989 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 MRPL12P52815 198 aaKnown RBP11.69□□□□□ -0.54
NEDD9-214ENST00000513989 TMEM132BQ14DG7 1078 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■■■□ 20.1
NEDD9-214ENST00000513989 QRICH1Q2TAL8 776 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 UBE2Q1Q7Z7E8 422 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 MCF2L2Q86YR7 1114 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 CCDC148Q8NFR7 591 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 PAGR1Q9BTK6 254 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 MAF1Q9H063 256 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 SPATC1LQ9H0A9 340 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
NEDD9-214ENST00000513989 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 FBXO40Q9UH90 709 aa11.69□□□□□ -0.54
NEDD9-214ENST00000513989 ABCB11O95342 1321 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 DNAH12Q6ZR08 3092 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 H3BQV1 296 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 JAK2O60674 1132 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 PPFIA3O75145 1194 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 CALML3P27482 149 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 GJB2P29033 226 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 GNA11P29992 359 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 GRK4P32298 578 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 NAPAP54920 295 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 SNAP25P60880 206 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 ERVK-9P63128 1117 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 ERVK-24P63145 666 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 LARP1BQ659C4 914 aaKnown RBP11.68□□□□□ -0.54
NEDD9-214ENST00000513989 SNRNP48Q6IEG0 339 aaKnown RBP11.68□□□□□ -0.54
NEDD9-214ENST00000513989 GALNT17Q6IS24 598 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 RIOX2Q8IUF8 465 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 SAMD3Q8N6K7 520 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 RGS22Q8NE09 1264 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 CUL5Q93034 780 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 IPO9Q96P70 1041 aaKnown RBP11.68□□□□□ -0.54
NEDD9-214ENST00000513989 ALG1Q9BT22 464 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 MROH8Q9H579 483 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 C6orf50Q9HD87 102 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 RBPJLQ9UBG7 517 aa11.68□□□□□ -0.54
NEDD9-214ENST00000513989 MYH8P13535 1937 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 hCG_1642624A0A1W2PR95 340 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 ALAS1P13196 640 aa11.67□□□□□ -0.54
NEDD9-214ENST00000513989 FXR1P51114 621 aaKnown RBP eCLIP11.67□□□□□ -0.54
NEDD9-214ENST00000513989 NLRP5P59047 1200 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms