RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	MUM1L1	Q5H9M0	696 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	RRP12	Q5JTH9	1297 aa	Known RBP	14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	SYDE2	Q5VT97	1194 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	TTBK2	Q6IQ55	1244 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	ESR2	Q92731	530 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	BAD	Q92934	168 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	MAF1	Q9H063	256 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	STARD7	Q9NQZ5	370 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	TOMM22	Q9NS69	142 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	MTMR10	Q9NXD2	777 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	CCPG1	Q9ULG6	757 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	ISY1	Q9ULR0	285 aa	Known RBP	14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	GNE	Q9Y223	722 aa	Known RBP	14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098		Q9Y3F1	56 aa		14.78	□□□□□ -0.04
UBE2D3-231	ENST00000513098	ASTN1	O14525	1302 aa		14.77	□□□□□ -0.04
UBE2D3-231	ENST00000513098	DCDC2C	A8MYV0	355 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ITGB8	P26012	769 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SNAP25	P60880	206 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CCDC96	Q2M329	555 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	GNAS	Q5JWF2	1037 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	IQSEC1	Q6DN90	963 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CCDC174	Q6PII3	467 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	RASGRP2	Q7LDG7	609 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	TBC1D10C	Q8IV04	446 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	GLT1D1	Q96MS3	346 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	DSCC1	Q9BVC3	393 aa		14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	PRDM5	Q9NQX1	630 aa	Predicted RBP	14.77	□□□□□ -0.05
UBE2D3-231	ENST00000513098	MROH7	Q68CQ1	1323 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	MYADML2	A6NDP7	307 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ASGR1	P07306	291 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	C6orf222	P0C671	652 aa	Predicted RBP	14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SLC16A2	P36021	539 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	TNFAIP2	Q03169	654 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ZNF543	Q08ER8	600 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SHH	Q15465	462 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	GPATCH4	Q5T3I0	446 aa	Known RBP	14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	TAPT1	Q6NXT6	567 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CWC27	Q6UX04	472 aa	Known RBP	14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	RGS22	Q8NE09	1264 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SEZ6L	Q9BYH1	1024 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	TMEM39A	Q9NV64	488 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	STXBP5L	Q9Y2K9	1186 aa		14.76	□□□□□ -0.05
UBE2D3-231	ENST00000513098	WDR19	Q8NEZ3	1342 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	PQBP1	O60828	265 aa	Known RBP	14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CABYR	O75952	493 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SLC43A3	Q8NBI5	491 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CLEC4D	Q8WXI8	215 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CHMP4C	Q96CF2	233 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	VTA1	Q9NP79	307 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	GPCPD1	Q9NPB8	672 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	DIAPH3	Q9NSV4	1193 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ADD3	Q9UEY8	706 aa	Known RBP	14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CTNNA3	Q9UI47	895 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098	TBX21	Q9UL17	535 aa		14.75	□□□□□ -0.05
UBE2D3-231	ENST00000513098		A0A0U1RQG5	324 aa	Predicted RBP	14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	RBM47	A0AV96	593 aa	Known RBP	14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ARVCF	O00192	962 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	TIMP1	P01033	207 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	RAG1	P15918	1043 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	IRX5	P78411	483 aa	Predicted RBP	14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	BAAT	Q14032	418 aa	Predicted RBP	14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	C9orf50	Q5SZB4	431 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	NSMF	Q6X4W1	530 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098		Q7L0L9	218 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	IQCA1	Q86XH1	822 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	MTMR7	Q9Y216	660 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CDH23	Q9H251	3354 aa		14.74	□□□□□ -0.05
UBE2D3-231	ENST00000513098	NEDD4	P46934	1319 aa		14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	FRMPD2	Q68DX3	1309 aa	Predicted RBP	14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	NFIB	O00712	420 aa		14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SMPD1	P17405	629 aa		14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SMAD3	P84022	425 aa	Known RBP	14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	IMMT	Q16891	758 aa	Known RBP	14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ZSWIM5	Q9P217	1185 aa		14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	SUPT16H	Q9Y5B9	1047 aa	Known RBP	14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	UNC80	Q8N2C7	3258 aa		14.73	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ZEB2	O60315	1214 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	KDM4A	O75164	1064 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CD4	P01730	458 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ALDH5A1	P51649	535 aa	Predicted RBP	14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	FPGS	Q05932	587 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	FSCN1	Q16658	493 aa	Known RBP	14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	DUSP28	Q4G0W2	176 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	MFSD5	Q6N075	450 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	TLK2	Q86UE8	772 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	FAM126B	Q8IXS8	530 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	PNMA1	Q8ND90	353 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	DNER	Q8NFT8	737 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	PURB	Q96QR8	312 aa	Known RBP	14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	KRT23	Q9C075	422 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	AP5M1	Q9H0R1	490 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	CNNM2	Q9H8M5	875 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	PDGFC	Q9NRA1	345 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	LCT	P09848	1927 aa		14.72	□□□□□ -0.05
UBE2D3-231	ENST00000513098	DYNC1LI2	O43237	492 aa	Predicted RBP	14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	EDNRB	P24530	442 aa		14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	PDE4A	P27815	886 aa		14.71	□□□□□ -0.05
UBE2D3-231	ENST00000513098	EPHB4	P54760	987 aa		14.71	□□□□□ -0.05

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms