RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 KANSL2Q9H9L4 492 aa14.95□□□□□ -0.02
DEPDC1B-206ENST00000512452 HERC5Q9UII4 1024 aaKnown RBP14.95□□□□□ -0.02
DEPDC1B-206ENST00000512452 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
DEPDC1B-206ENST00000512452 SIPA1L1O43166 1804 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 ZNF543Q08ER8 600 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 CERKLQ49MI3 558 aaPredicted RBP14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 KRBA2Q6ZNG9 492 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 KRT25Q7Z3Z0 450 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 HEATR3Q7Z4Q2 680 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 DCAF4Q8WV16 495 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 C6orf50Q9HD87 102 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 CLIP2Q9UDT6 1046 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 TUBE1Q9UJT0 475 aa14.94□□□□□ -0.02
DEPDC1B-206ENST00000512452 RPTORQ8N122 1335 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 CCDC194A0A1B0GVG4 234 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 USP17L5A8MUK1 530 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 LAD1O00515 517 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 EGFRP00533 1210 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 TPM3P06753 285 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 NLRP12P59046 1061 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 EARS2Q5JPH6 523 aaKnown RBP14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 RBM26Q5T8P6 1007 aaKnown RBP14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 USP17L2Q6R6M4 530 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 PIK3AP1Q6ZUJ8 805 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 OGFOD1Q8N543 542 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 CLIC6Q96NY7 704 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 DNAJC25Q9H1X3 360 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 DNAJC18Q9H819 358 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 VCANP13611 3396 aa14.93□□□□□ -0.02
DEPDC1B-206ENST00000512452 TMEM265A0A087WTH1 108 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 FAM205CA6NFA0 338 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 DDTLA6NHG4 134 aaPredicted RBP14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 ESPNB1AK53 854 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 PSMD14O00487 310 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 ADCY5O95622 1261 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 NAPAP54920 295 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 IQCB1Q15051 598 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 DLGAP5Q15398 846 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 SARM1Q6SZW1 724 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 MOB2Q70IA6 237 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 ZSCAN30Q86W11 494 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 ZSCAN29Q8IWY8 852 aaPredicted RBP14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 ZFPM1Q8IX07 1006 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 GPKOWQ92917 476 aaPredicted RBP eCLIP14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 PRMT6Q96LA8 375 aaPredicted RBP14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 GLT8D2Q9H1C3 349 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 TDRD3Q9H7E2 651 aaKnown RBP14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 PCDHA6Q9UN73 950 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 PCDHA8Q9Y5H6 950 aa14.92□□□□□ -0.02
DEPDC1B-206ENST00000512452 PNMA6FA0A0J9YX94 578 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 GOLGA6L19H0YKK7 550 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 MPHOSPH10O00566 681 aaKnown RBP14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 GOLGA8HP0CJ92 632 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 ATP2B1P20020 1258 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 SPDYE2Q495Y8 402 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 TYW1BQ6NUM6 668 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 FAM83AQ86UY5 434 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 LUZP1Q86V48 1076 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 TEX2Q8IWB9 1127 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 FAM151AQ8WW52 585 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 DPF2Q92785 391 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 MTMR8Q96EF0 704 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 CSRNP2Q9H175 543 aa14.91□□□□□ -0.02
DEPDC1B-206ENST00000512452 LAMA3Q16787 3333 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 GOLGA6L6A8MZA4 724 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 TNFRSF10AO00220 468 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 RPS12P25398 132 aaKnown RBP14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 LONP1P36776 959 aaKnown RBP14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 PRPHP41219 470 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 TCP10Q12799 353 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 PTGDRQ13258 359 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 NONOQ15233 471 aaKnown RBP eCLIP14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 ABCB5Q2M3G0 1257 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 TRIML1Q8N9V2 468 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 GMCL1P1Q8NEA9 526 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 PIGSQ96S52 555 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 ZNF70Q9UC06 446 aaPredicted RBP14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 PCDHAC2Q9Y5I4 1007 aa14.9□□□□□ -0.02
DEPDC1B-206ENST00000512452 SMCO2A6NFE2 343 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 SMTNL1A8MU46 457 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 BECN2A8MW95 431 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 MYO1BO43795 1136 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 TBC1D12O60347 775 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 CDC25BP30305 580 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 CACNB3P54284 484 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 TPM4P67936 248 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 ZNF174Q15697 407 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 LONRF3Q496Y0 759 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 CT47A1Q5JQC4 288 aaPredicted RBP14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 NT5DC1Q5TFE4 455 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms