RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 A0A1W2PQY0 241 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 IQCA1LA6NCM1 817 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 CBFA2T2O43439 604 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 GSTM1P09488 218 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 ARL4AP40617 200 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 EEF1DP3Q658K8 133 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 GALNT18Q6P9A2 607 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 CRTC3Q6UUV7 619 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 C6orf15Q6UXA7 325 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 JAMLQ86YT9 394 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 ARHGEF39Q8N4T4 335 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 LINC01599Q8WXQ3 324 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 KLHL6Q8WZ60 621 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 MAP6Q96JE9 813 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 ZDHHC15Q96MV8 337 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 SLC6A17Q9H1V8 727 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 CDK11AQ9UQ88 783 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 ZNF281Q9Y2X9 895 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 TAF6LQ9Y6J9 622 aa6.32□□□□□ -1.4
HMGB3P13-201ENST00000511263 NCANO14594 1321 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 UNC13AQ9UPW8 1703 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 CD3EP07766 207 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 GTF2F1P35269 517 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 SEPHS1P49903 392 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 PPP2R5DQ14738 602 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 SV2CQ496J9 727 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 OLFML2BQ68BL8 750 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 CEP128Q6ZU80 1094 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 SIAH1Q8IUQ4 282 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 FGD4Q96M96 766 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 CCDC140Q96MF4 163 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 GPR160Q9UJ42 338 aa6.31□□□□□ -1.4
HMGB3P13-201ENST00000511263 NPIPB6E9PJ23 425 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 H0Y8X5 98 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 PRRG2O14669 202 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 IGSF3O75054 1194 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 CTSKP43235 329 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 RTP1P59025 263 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 TMEM62Q0P6H9 643 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 LAPTM5Q13571 262 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 RAB33AQ14088 237 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 RCSD1Q6JBY9 416 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 TTLL10Q6ZVT0 673 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 ADCY4Q8NFM4 1077 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 SREK1Q8WXA9 508 aaKnown RBP6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 CGGBP1Q9UFW8 167 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 EIF4G1Q04637 1599 aaKnown RBP6.3□□□□□ -1.4
HMGB3P13-201ENST00000511263 A0A1W2PQJ5 194 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 NFIBO00712 420 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 NRDCO43847 1150 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 SUSD5O60279 629 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 DDR2Q16832 855 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 YTHDC1Q96MU7 727 aaKnown RBP6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 SLC12A9Q9BXP2 914 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 AP5S1Q9NUS5 200 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 SIRPGQ9P1W8 387 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 BACE2Q9Y5Z0 518 aa6.29□□□□□ -1.4
HMGB3P13-201ENST00000511263 SMARCA4P51532 1647 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 TMEM82A0PJX8 343 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 B8ZZF3 427 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 AURKAO14965 403 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 CPP00450 1065 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 BUD31P41223 144 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 IQCEQ6IPM2 695 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 IRF2BP1Q8IU81 584 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 ST13P5Q8NFI4 369 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 HNRNPLLQ8WVV9 542 aaKnown RBP6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 ZNF669Q96BR6 464 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 ERVK13-1Q9NX77 482 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 MINPP1Q9UNW1 487 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 EMC9Q9Y3B6 208 aa6.28□□□□□ -1.4
HMGB3P13-201ENST00000511263 C2orf71A6NGG8 1288 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 FADS2P1A8MWK0 482 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 ABLIM1O14639 778 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 FGF10O15520 208 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 KLF4O43474 513 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 USP2O75604 605 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 KCNH1O95259 989 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 GJB6O95452 261 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 PAMP19021 973 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 HOXC12P31275 282 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 CORO7P57737 925 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 ERVFC1P60507 584 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 ATG14Q6ZNE5 492 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 CABP7Q86V35 215 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 LRRC47Q8N1G4 583 aaKnown RBP6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 SGSM3Q96HU1 749 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 HHIPL1Q96JK4 782 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 PTCHD1Q96NR3 888 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 FCRL3Q96P31 734 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 CD320Q9NPF0 282 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 CYP26B1Q9NR63 512 aa6.27□□□□□ -1.41
HMGB3P13-201ENST00000511263 INHBBP09529 407 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 PNLIPP16233 465 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 L1CAMP32004 1257 aa6.26□□□□□ -1.41
HMGB3P13-201ENST00000511263 RTP2Q5QGT7 225 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms