RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 VPS37DQ86XT2 251 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MIPOL1Q8TD10 442 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MKL1Q969V6 931 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 DNAJC7Q99615 494 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MMADHCQ9H3L0 296 aaPredicted RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 PLCB1Q9NQ66 1216 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 NFU1Q9UMS0 254 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 AMOTL2Q9Y2J4 779 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 BCL9LQ86UU0 1499 aa11.08□□□□□ -0.63
PDGFRA-207ENST00000509092 LRRC10BA6NIK2 292 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 F8W031 263 aaPredicted RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 POLR2DO15514 142 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 CREB3O43889 395 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 ATP2A2P16615 1042 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 TCP1P17987 556 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 TMOD1P28289 359 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 CYLC1P35663 651 aaPredicted RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 CARSP49589 748 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 COPB1P53618 953 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 MST1RQ04912 1400 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 FKBP15Q5T1M5 1219 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 HDGFL1Q5TGJ6 251 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 KLHL10Q6JEL2 608 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 CACNA2D4Q7Z3S7 1137 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 SMCR8Q8TEV9 937 aaPredicted RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 EDC3Q96F86 508 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 RBM17Q96I25 401 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 LACRTQ9GZZ8 138 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 PEAK1Q9H792 1746 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 PIDD1Q9HB75 910 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 FMN2Q9NZ56 1722 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 SPAG1Q07617 926 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 TEFQ10587 303 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 MAP3K12Q12852 859 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 CMPK2Q5EBM0 449 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 ACBD5Q5T8D3 534 aaPredicted RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 ERICH1Q86X53 443 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 LMNTD2Q8IXW0 634 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 GRAMD1CQ8IYS0 662 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 DSCC1Q9BVC3 393 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 ZCWPW1Q9H0M4 648 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 DNAAF2Q9NVR5 837 aaKnown RBP11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 TAOK2Q9UL54 1235 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 ROBO2Q9HCK4 1378 aa11.08□□□□□ -0.64
PDGFRA-207ENST00000509092 RCCD1A6NED2 376 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 SH2B2O14492 632 aaPredicted RBP11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 ACTN4O43707 911 aaKnown RBP11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 PAFAH1B1P43034 410 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 GNAQP50148 359 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 ALDH5A1P51649 535 aaPredicted RBP11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 DBN1Q16643 649 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 AGBL2Q5U5Z8 902 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 ANO7Q6IWH7 933 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 SEC31BQ9NQW1 1179 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 PCMTD2Q9NV79 361 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 AFF2P51816 1311 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 CPLX1O14810 134 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 MAP3K13O43283 966 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 GUCY2FP51841 1108 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 ADAM9Q13443 819 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 CHST3Q7LGC8 479 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 TRIM42Q8IWZ5 723 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 SPICE1Q8N0Z3 855 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 CHMP6Q96FZ7 201 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 ZWILCHQ9H900 591 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 CWC25Q9NXE8 425 aaPredicted RBP11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 PHF24Q9UPV7 400 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 MYH7BA7E2Y1 1941 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 ABCC12Q96J65 1359 aa11.07□□□□□ -0.64
PDGFRA-207ENST00000509092 PARP4Q9UKK3 1724 aaKnown RBP11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 MYH1P12882 1939 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 TTC26A0AVF1 554 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 GOLGA8BA8MQT2 603 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 BACH1O14867 736 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 TACC1O75410 805 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 HEXIM1O94992 359 aaKnown RBP11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 UPP2O95045 317 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 GLI1P08151 1106 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 ZBED6P86452 979 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 MYBPC3Q14896 1274 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 TTF1Q15361 905 aaPredicted RBP11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 IMMTQ16891 758 aaKnown RBP11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 WDR59Q6PJI9 974 aa11.06□□□□□ -0.64
PDGFRA-207ENST00000509092 APBB1IPQ7Z5R6 666 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms