RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 ABCB11O95342 1321 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 BTBD19C9JJ37 291 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 TMEM132BQ14DG7 1078 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 A0A0G2JMZ2 1700 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 PDHXO00330 501 aa16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 MRPL12P52815 198 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 OAZ1P54368 228 aa16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 HERVK_113P62684 666 aa16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 EARS2Q5JPH6 523 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 MYSM1Q5VVJ2 828 aa16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 REXO1Q8N1G1 1221 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 HHIPL1Q96JK4 782 aa16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 PNMA3Q9UL41 463 aa16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 ZNF214Q9UL59 606 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-211ENST00000509023 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 OPLAHO14841 1288 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 ALAS1P13196 640 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 UBE2SQ16763 222 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 POTEEQ6S8J3 1075 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 LBX2Q6XYB7 198 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 PIK3AP1Q6ZUJ8 805 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 ANKRD23Q86SG2 305 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 CCDC102AQ96A19 550 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 GLT8D2Q9H1C3 349 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 PNMA2Q9UL42 364 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 SLC45A1Q9Y2W3 748 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 PLS1Q14651 629 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 MB21D1Q8N884 522 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 PTPN18Q99952 460 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 HOMER2Q9NSB8 354 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 CNPY2Q9Y2B0 182 aa16.98■□□□□ 0.31
SNCAIP-211ENST00000509023 CCDC194A0A1B0GVG4 234 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 TESPA1A2RU30 521 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 MANSC4A6NHS7 340 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 ATP2A1O14983 1001 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 CYP2C8P10632 490 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 CLK2P49760 499 aaKnown RBP16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 KRT85P78386 507 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 JAKMIP3Q5VZ66 844 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 USP17L6PQ6QN14 398 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 PAXIP1Q6ZW49 1069 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 TEX13BQ9BXU2 312 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 BTBD7Q9P203 1132 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 MEIS2O14770 477 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 PEX10O60683 326 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 FTOQ9C0B1 505 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 TFIP11Q9UBB9 837 aaKnown RBP16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 RIPK3Q9Y572 518 aa16.97■□□□□ 0.31
SNCAIP-211ENST00000509023 STAT3P40763 770 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 APLP1P51693 650 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 RILPL1Q5EBL4 403 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 TRERF1Q96PN7 1200 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 USP28Q96RU2 1077 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 PAGR1Q9BTK6 254 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 CREBZFQ9NS37 354 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 TCHHQ07283 1943 aa16.96■□□□□ 0.31
SNCAIP-211ENST00000509023 NFIBO00712 420 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 FIBPO43427 364 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 CFBP00751 764 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 TOB1P50616 345 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 GRM1Q13255 1194 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 CYP4F22Q6NT55 531 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 PGBD1Q96JS3 809 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 GDPD2Q9HCC8 539 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 RNF146Q9NTX7 359 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 CFAP45Q9UL16 551 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 PIK3CDO00329 1044 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 CNMDO75829 334 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 HOXA13P31271 388 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 NONOQ15233 471 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 ATL3Q6DD88 541 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 TBC1D5Q92609 795 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 TXNRD2Q9NNW7 524 aa16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 NOL7Q9UMY1 257 aaKnown RBP16.95■□□□□ 0.3
SNCAIP-211ENST00000509023 GCOM1H8Y6P7 765 aaPredicted RBP16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 POLR2MP0CAP2 368 aa16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 ATP2B1P20020 1258 aa16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 NBR1Q14596 966 aa16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 INF2Q27J81 1249 aa16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 MCF2L2Q86YR7 1114 aa16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 GTF3C2Q8WUA4 911 aaPredicted RBP16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 PARK7Q99497 189 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 SPATC1LQ9H0A9 340 aa16.94■□□□□ 0.3
SNCAIP-211ENST00000509023 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms