RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZNF408Q9H9D4 720 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 GCM1Q9NP62 436 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 SUGT1Q9Y2Z0 365 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 TEX51A0A1B0GUA7 166 aa8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 MSL3P1P0C860 447 aa8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 ZNF143P52747 638 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 YBX1P67809 324 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 CYP4F8P98187 520 aa8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 LAPTM5Q13571 262 aa8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 EEF1DP3Q658K8 133 aa8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 C6orf15Q6UXA7 325 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-206ENST00000508524 B2RBV5 119 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 E9PSI1 815 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 DNAJA1P31689 397 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 ARL4AP40617 200 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 DLG4P78352 724 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 AMPD2Q01433 879 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 ANKLE2Q86XL3 938 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 JAMLQ86YT9 394 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 C1QL4Q86Z23 238 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 SLC43A3Q8NBI5 491 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 EMC9Q9Y3B6 208 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 BACE2Q9Y5Z0 518 aa8.61□□□□□ -1.03
TOPBP1-206ENST00000508524 TBC1D8O95759 1140 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 LARP1BQ659C4 914 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 FAM178BQ8IXR5 827 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 BVESQ8NE79 360 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 MICAL1Q8TDZ2 1067 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 GMLQ99445 158 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 APBA2Q99767 749 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 SGPP1Q9BX95 441 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 KLHL14Q9P2G3 628 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 SMG5Q9UPR3 1016 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 AKT3Q9Y243 479 aa8.6□□□□□ -1.03
TOPBP1-206ENST00000508524 TCAF2A6NFQ2 919 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 C2orf71A6NGG8 1288 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 NPIPB6E9PJ23 425 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 NAT2P11245 290 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 CFPP27918 469 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 VIPR1P32241 457 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 KCNA10Q16322 511 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 MRM1Q6IN84 353 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 LGR4Q9BXB1 951 aa8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 MBD1Q9UIS9 605 aaPredicted RBP8.59□□□□□ -1.03
TOPBP1-206ENST00000508524 KCNH1O95259 989 aa8.58□□□□□ -1.04
TOPBP1-206ENST00000508524 MPOP05164 745 aa8.58□□□□□ -1.04
TOPBP1-206ENST00000508524 SEPHS1P49903 392 aa8.58□□□□□ -1.04
TOPBP1-206ENST00000508524 CORO7P57737 925 aa8.58□□□□□ -1.04
TOPBP1-206ENST00000508524 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
TOPBP1-206ENST00000508524 MRGPRX3Q96LB0 322 aa8.58□□□□□ -1.04
TOPBP1-206ENST00000508524 TOX2Q96NM4 488 aa8.58□□□□□ -1.04
TOPBP1-206ENST00000508524 NUDT19A8MXV4 375 aa8.57□□□□□ -1.04
TOPBP1-206ENST00000508524 L1CAMP32004 1257 aa8.57□□□□□ -1.04
TOPBP1-206ENST00000508524 LINC00310P59036 64 aa8.57□□□□□ -1.04
TOPBP1-206ENST00000508524 RAB3GAP1Q15042 981 aa8.57□□□□□ -1.04
TOPBP1-206ENST00000508524 TRIM59Q8IWR1 403 aa8.57□□□□□ -1.04
TOPBP1-206ENST00000508524 LRRC56Q8IYG6 542 aaPredicted RBP8.57□□□□□ -1.04
TOPBP1-206ENST00000508524 NLGN2Q8NFZ4 835 aa8.57□□□□□ -1.04
TOPBP1-206ENST00000508524 A0A1W2PQ27 194 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 A0A1W2PQ64 194 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 A0A1W2PQC6 194 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 A0A1W2PQD8 194 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 ABLIM1O14639 778 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 SUSD5O60279 629 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 CBX2Q14781 532 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 FXNQ16595 210 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 POMZP3Q6PJE2 187 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 RPTNQ6XPR3 784 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 CRACR2BQ8N4Y2 399 aaPredicted RBP8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 COPS5Q92905 334 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 CNTD2Q9H8S5 307 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 PDLIM7Q9NR12 457 aa8.56□□□□□ -1.04
TOPBP1-206ENST00000508524 SRGAP3O43295 1099 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 DDAH1O94760 285 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 DBHP09172 617 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 EPHB3P54753 998 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 CYP4F3Q08477 520 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 SCRN1Q12765 414 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 OLFML2BQ68BL8 750 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 GTF2IRD2BQ6EKJ0 949 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 SPOCD1Q6ZMY3 1216 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 GTF2IRD2Q86UP8 949 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 HNRNPLLQ8WVV9 542 aaKnown RBP8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 SIRT5Q9NXA8 310 aa8.55□□□□□ -1.04
TOPBP1-206ENST00000508524 NOP56O00567 594 aaKnown RBP8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 TBX1O43435 398 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 TACR1P25103 407 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 PLEKHN1Q494U1 663 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 TMC6Q7Z403 805 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 CPNE8Q86YQ8 564 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 CELF2-AS1Q8N7Q2 184 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 PPP1R14AQ96A00 147 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 FBLN5Q9UBX5 448 aa8.54□□□□□ -1.04
TOPBP1-206ENST00000508524 GJB6O95452 261 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 ITGAVP06756 1048 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 PAMP19021 973 aa8.53□□□□□ -1.04
TOPBP1-206ENST00000508524 CDR1P51861 262 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms