RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 TRMT1LQ7Z2T5 733 aaKnown RBP13.04□□□□□ -0.32
SMG7-212ENST00000507469 TMEM47Q9BQJ4 181 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
SMG7-212ENST00000507469 LGALS16A8MUM7 142 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 USP8P40818 1118 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 RNASE9P60153 205 aaKnown RBP13.04□□□□□ -0.32
SMG7-212ENST00000507469 STAG2Q8N3U4 1231 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 NT5C3AQ9H0P0 336 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 GOLGA6BA6NDN3 693 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
SMG7-212ENST00000507469 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 ZBED6P86452 979 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 TROAPQ12815 778 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 ITPK1Q13572 414 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
SMG7-212ENST00000507469 FAM13AO94988 1023 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 CDK8P49336 464 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 NT5C2P49902 561 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 INTS5Q6P9B9 1019 aaKnown RBP13.03□□□□□ -0.32
SMG7-212ENST00000507469 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMG7-212ENST00000507469 GPR101Q96P66 508 aaPredicted RBP13.03□□□□□ -0.32
SMG7-212ENST00000507469 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 KLHL30Q0D2K2 578 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 ASIC2Q16515 512 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 LMBR1Q8WVP7 490 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 NHEJ1Q9H9Q4 299 aaPredicted RBP13.03□□□□□ -0.32
SMG7-212ENST00000507469 DDX25Q9UHL0 483 aaKnown RBP13.03□□□□□ -0.32
SMG7-212ENST00000507469 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 TNNC1P63316 161 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 GRM4Q14833 912 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 CFAP58Q5T655 872 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 C10orf67Q8IYJ2 551 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 NUCKS1Q9H1E3 243 aaKnown RBP13.03□□□□□ -0.32
SMG7-212ENST00000507469 ABCB6Q9NP58 842 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 RPS6KA4O75676 772 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 CCDC172P0C7W6 258 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMG7-212ENST00000507469 RAD9BQ6WBX8 426 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 COA7Q96BR5 231 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
SMG7-212ENST00000507469 TTC26A0AVF1 554 aa13.02□□□□□ -0.32
SMG7-212ENST00000507469 TRAF1Q13077 416 aa13.02□□□□□ -0.32
SMG7-212ENST00000507469 TMED8Q6PL24 325 aaPredicted RBP13.02□□□□□ -0.32
SMG7-212ENST00000507469 HINFPQ9BQA5 517 aa13.02□□□□□ -0.32
SMG7-212ENST00000507469 ST7Q9NRC1 585 aa13.02□□□□□ -0.32
SMG7-212ENST00000507469 PANK4Q9NVE7 773 aa13.02□□□□□ -0.32
SMG7-212ENST00000507469 LIMA1Q9UHB6 759 aaKnown RBP13.02□□□□□ -0.32
SMG7-212ENST00000507469 GRAPQ13588 217 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 SEC23AQ15436 765 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 CFAP221Q4G0U5 840 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 FAM26FQ5R3K3 315 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 FAM182BQ5T319 152 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
SMG7-212ENST00000507469 LSM14BQ9BX40 385 aaKnown RBP13.02□□□□□ -0.33
SMG7-212ENST00000507469 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 TCP10Q12799 353 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 LRRC41Q15345 812 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 GPBP1Q86WP2 473 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 BARHL2Q9NY43 387 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 DNM3Q9UQ16 869 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 HYOU1Q9Y4L1 999 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
SMG7-212ENST00000507469 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 RIOK1Q9BRS2 568 aaKnown RBP13.01□□□□□ -0.33
SMG7-212ENST00000507469 STK17AQ9UEE5 414 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 KDM3AQ9Y4C1 1321 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 LMO7Q8WWI1 1683 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 FOXP2O15409 715 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 EPB41P11171 864 aaKnown RBP13.01□□□□□ -0.33
SMG7-212ENST00000507469 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 C12orf60Q5U649 245 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 MED4Q9NPJ6 270 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 BUB1O43683 1085 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 ZMYND10O75800 440 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 GNA14O95837 355 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 TCP1P17987 556 aaKnown RBP13.01□□□□□ -0.33
SMG7-212ENST00000507469 MAN2A1Q16706 1144 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 IFT20Q8IY31 132 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 ZCCHC17Q9NP64 241 aaKnown RBP13.01□□□□□ -0.33
SMG7-212ENST00000507469 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 EBAG9O00559 213 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
SMG7-212ENST00000507469 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
SMG7-212ENST00000507469 MARCH10Q8NA82 808 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms