RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
TRIM6-209ENST00000507320 GTF3C2Q8WUA4 911 aaPredicted RBP12.31□□□□□ -0.44
TRIM6-209ENST00000507320 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
TRIM6-209ENST00000507320 SMC3Q9UQE7 1217 aa12.31□□□□□ -0.44
TRIM6-209ENST00000507320 ZSWIM8A7E2V4 1837 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 STXBP3O00186 592 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 OPLAHO14841 1288 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 FOSBP53539 338 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
TRIM6-209ENST00000507320 MUM1L1Q5H9M0 696 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 ALG1Q9BT22 464 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 EFCC1Q9HA90 598 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 BARHL2Q9NY43 387 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
TRIM6-209ENST00000507320 TSKSQ9UJT2 592 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 NFIBO00712 420 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 ADAMTS3O15072 1205 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
TRIM6-209ENST00000507320 ERCC3P19447 782 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 MAP2K1Q02750 393 aaPredicted RBP12.3□□□□□ -0.44
TRIM6-209ENST00000507320 CLEC4DQ8WXI8 215 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 TRERF1Q96PN7 1200 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 WBP1LQ9NX94 342 aa12.3□□□□□ -0.44
TRIM6-209ENST00000507320 NAPAP54920 295 aa12.29□□□□□ -0.44
TRIM6-209ENST00000507320 CAP1Q01518 475 aa12.29□□□□□ -0.44
TRIM6-209ENST00000507320 NCAPG2Q86XI2 1143 aa12.29□□□□□ -0.44
TRIM6-209ENST00000507320 FAM184AQ8NB25 1140 aa12.29□□□□□ -0.44
TRIM6-209ENST00000507320 TBC1D5Q92609 795 aa12.29□□□□□ -0.44
TRIM6-209ENST00000507320 RNF146Q9NTX7 359 aa12.29□□□□□ -0.44
TRIM6-209ENST00000507320 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
TRIM6-209ENST00000507320 CTGFP29279 349 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 GUCY1B3Q02153 619 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 SAGE1Q9NXZ1 904 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 ABCB11O95342 1321 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
TRIM6-209ENST00000507320 hCG_1984214I3L0E3 225 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 NPY5RQ15761 445 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 ZNF713Q8N859 430 aaPredicted RBP12.28□□□□□ -0.44
TRIM6-209ENST00000507320 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 WASF1Q92558 559 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 ARHGAP39Q9C0H5 1083 aa12.28□□□□□ -0.44
TRIM6-209ENST00000507320 MGAMO43451 1857 aa12.27□□□□□ -0.44
TRIM6-209ENST00000507320 LCTP09848 1927 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 PLXNB2O15031 1838 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.45
TRIM6-209ENST00000507320 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 GPR25O00155 361 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 SLC25A27O95847 323 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 CCNA1P78396 465 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 KRT40Q6A162 431 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 SHCBP1Q8NEM2 672 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 CHST13Q8NET6 341 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 C8orf76Q96K31 380 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 PHF20Q9BVI0 1012 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 ZMYND12Q9H0C1 365 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 ACAD9Q9H845 621 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 A1CFQ9NQ94 594 aaKnown RBP12.27□□□□□ -0.45
TRIM6-209ENST00000507320 SH3GLB2Q9NR46 395 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 MRPL11Q9Y3B7 192 aaKnown RBP12.27□□□□□ -0.45
TRIM6-209ENST00000507320 CENPFP49454 3210 aa12.27□□□□□ -0.45
TRIM6-209ENST00000507320 MEIS2O14770 477 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 CFBP00751 764 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 HOXA13P31271 388 aaPredicted RBP12.26□□□□□ -0.45
TRIM6-209ENST00000507320 LACTBP83111 547 aaPredicted RBP12.26□□□□□ -0.45
TRIM6-209ENST00000507320 SP3Q02447 781 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 TKFCQ3LXA3 575 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 USP17L6PQ6QN14 398 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 NSMFQ6X4W1 530 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 GPR142Q7Z601 462 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 FBXO18Q8NFZ0 1043 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 PURBQ96QR8 312 aaKnown RBP12.26□□□□□ -0.45
TRIM6-209ENST00000507320 MROH8Q9H579 483 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 PSTPIP2Q9H939 334 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
TRIM6-209ENST00000507320 ESYT2A0FGR8 921 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 SYT1P21579 422 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 NLRP5P59047 1200 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
TRIM6-209ENST00000507320 TRAF1Q13077 416 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
TRIM6-209ENST00000507320 UBE2SQ16763 222 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 LARP1BQ659C4 914 aaKnown RBP12.25□□□□□ -0.45
TRIM6-209ENST00000507320 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 SLC30A10Q6XR72 485 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 CCAR1Q8IX12 1150 aaKnown RBP12.25□□□□□ -0.45
TRIM6-209ENST00000507320 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 OXER1Q8TDS5 423 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 ZNF296Q8WUU4 475 aaPredicted RBP12.25□□□□□ -0.45
TRIM6-209ENST00000507320 RIC8AQ9NPQ8 531 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 COL20A1Q9P218 1284 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 HTTP42858 3142 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 MMP1P03956 469 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 XBP1P17861 261 aa12.25□□□□□ -0.45
TRIM6-209ENST00000507320 MAPK4P31152 587 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms