RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 LINC00116Q8NCU8 138 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 RGS22Q8NE09 1264 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 VOPP1Q96AW1 172 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 HHIPL1Q96JK4 782 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 ZNF512BQ96KM6 892 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 FCRL2Q96LA5 508 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 CEP89Q96ST8 783 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 CDK5RAP1Q96SZ6 601 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 BRMS1Q9HCU9 246 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 GPR55Q9Y2T6 319 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 TMEM82A0PJX8 343 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 MEIS1O00470 390 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 SIGLEC6O43699 453 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 ERCC3P19447 782 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 ENDOUP21128 410 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 GARTP22102 1010 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 ARL4AP40617 200 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 MVKQ03426 396 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 GALNT18Q6P9A2 607 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 ZPBP2Q6X784 338 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 BHLHA9Q7RTU4 235 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 DNAJC10Q8IXB1 793 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 CARFQ8N187 725 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 PLCD4Q9BRC7 762 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 CDADC1Q9BWV3 514 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 LRRC3Q9BY71 257 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 MKRN2Q9H000 416 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 PMF1-BGLAPU3KQ54 211 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 ROBO2Q9HCK4 1378 aa4.61□□□□□ -1.67
TOPBP1-205ENST00000506779 EIF4A3P38919 411 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 DLX2Q07687 328 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 FBXL19Q6PCT2 694 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 GK5Q6ZS86 529 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 NLRC3Q7RTR2 1065 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 KLC2Q9H0B6 622 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 BCL11AQ9H165 835 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 COPRSQ9NQ92 184 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 CHST7Q9NS84 486 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 TNFRSF10DQ9UBN6 386 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 FBXL21Q9UKT6 434 aa4.6□□□□□ -1.67
TOPBP1-205ENST00000506779 WTIPA6NIX2 430 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 MCM4P33991 863 aa4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 HTRA3P83110 453 aa4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 FOXO4P98177 505 aa4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 TAGLNQ01995 201 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 HSF5Q4G112 596 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 ERMP1Q7Z2K6 904 aa4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 IKZF4Q9H2S9 585 aa4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 MINPP1Q9UNW1 487 aa4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 CCDC9Q9Y3X0 531 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 PCDHB12Q9Y5F1 795 aa4.59□□□□□ -1.67
TOPBP1-205ENST00000506779 FADS2P1A8MWK0 482 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 NUDT19A8MXV4 375 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 PPFIA2O75334 1257 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 ATE1O95260 518 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 PRKCAP17252 672 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 CCNFP41002 786 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 CRKP46108 304 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 APOBRQ0VD83 1088 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 LAPTM5Q13571 262 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 CBX2Q14781 532 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 SEZ6Q53EL9 994 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 GLB1LQ6UWU2 654 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 HS2ST1Q7LGA3 356 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 LIMS2Q7Z4I7 341 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 NAT16Q8N8M0 369 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 NUP43Q8NFH3 380 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF296Q8WUU4 475 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 ATG4CQ96DT6 458 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 DSCC1Q9BVC3 393 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 CNNM2Q9H8M5 875 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 KCNQ5Q9NR82 932 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 GFOD1Q9NXC2 390 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 GGT7Q9UJ14 662 aa4.58□□□□□ -1.68
TOPBP1-205ENST00000506779 A0A1W2PQ27 194 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 A0A1W2PQ64 194 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 A0A1W2PQC6 194 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 A0A1W2PQD8 194 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 IL12RB1P42701 662 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF165P49910 485 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 CYP4F8P98187 520 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 TARBP2Q15633 366 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 CRTC3Q6UUV7 619 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 SLC6A18Q96N87 628 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 EHMT1Q9H9B1 1298 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 ERVK13-1Q9NX77 482 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 UBP1Q9NZI7 540 aa4.57□□□□□ -1.68
TOPBP1-205ENST00000506779 A0A1W2PQ45 241 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 A0A1W2PQY0 241 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 FAM86C2PA6NEL3 165 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 GREM1O60565 184 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF205O95201 554 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 NME1P15531 152 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 BMP8BP34820 402 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 ZNF200P98182 395 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 CLCQ05315 142 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 ICAM4Q14773 271 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 KIR3DS1Q14943 382 aa4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 LRRFIP1Q32MZ4 808 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-205ENST00000506779 SLCO6A1Q86UG4 719 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms