RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LEFTY1O75610 366 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 PRAMEF1O95521 474 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 GSNP06396 782 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 NTRK3Q16288 839 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 CLEC16AQ2KHT3 1053 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 DPY19L1Q2PZI1 675 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 SLC35F1Q5T1Q4 408 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 FGD2Q7Z6J4 655 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 TXNRD3Q86VQ6 643 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 DZIP1LQ8IYY4 767 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 ARMC10Q8N2F6 343 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 DTWD2Q8NBA8 298 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 SSBP4Q9BWG4 385 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 GTF2IRD1Q9UHL9 959 aa4.38□□□□□ -1.71
TRAPPC11-205ENST00000506426 TCRBV16S1A1N1A0A5B0 115 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 H0Y8X5 98 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 MEIS1O00470 390 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 DHX15O43143 795 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 EYA4O95677 639 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM87AP0C7U9 286 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 GUCY2FP51841 1108 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 SCRN1Q12765 414 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 STRN3Q13033 797 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM50AQ14320 339 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 PCBP1Q15365 356 aaKnown RBP eCLIP4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 DHCR24Q15392 516 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 PRSS53Q2L4Q9 553 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 CFAP100Q494V2 611 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 STYK1Q6J9G0 422 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 BEND4Q6ZU67 534 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM214BQ7L5A3 538 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 STRA8Q7Z7C7 330 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 CLEC10AQ8IUN9 316 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 WDR66Q8TBY9 1149 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 PIWIL2Q8TC59 973 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 C1orf159Q96HA4 380 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 SCLYQ96I15 445 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 Q96M66 194 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZFYVE21Q9BQ24 234 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 MTFR1LQ9H019 292 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 TCEAL9Q9UHQ7 104 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 ST14Q9Y5Y6 855 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 CNTNAP4Q9C0A0 1308 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 WASHC2CQ9Y4E1 1318 aa4.37□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM83GA6ND36 823 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 C2orf71A6NGG8 1288 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 GNAT3A8MTJ3 354 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 IGF2BP3O00425 579 aaKnown RBP eCLIP4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 AURKAO14965 403 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 BRINP1O60477 761 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 KPNA6O60684 536 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 CRTAMO95727 393 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 CD3EP07766 207 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 JMJD7P0C870 316 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 GUCY1A3Q02108 690 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZNF460Q14592 562 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 CYP27C1Q4G0S4 372 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 RNF219Q5W0B1 726 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 CDCA2Q69YH5 1023 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 PKN3Q6P5Z2 889 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 OGFOD3Q6PK18 319 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 RSPO2Q6UXX9 243 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 DDX53Q86TM3 631 aaKnown RBP4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 FMNL3Q8IVF7 1028 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZNF655Q8N720 491 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 DAGLBQ8NCG7 672 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 KREMEN2Q8NCW0 462 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 COPS5Q92905 334 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 USP7Q93009 1102 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 WNK4Q96J92 1243 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 MEGF10Q96KG7 1140 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM83CQ9BQN1 747 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 MINPP1Q9UNW1 487 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 TRAF6Q9Y4K3 522 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 PCDHA9Q9Y5H5 950 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 BACE2Q9Y5Z0 518 aa4.36□□□□□ -1.71
TRAPPC11-205ENST00000506426 MEFVO15553 781 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 COBLO75128 1261 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 ALDH1L1O75891 902 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 RASGRP1O95267 797 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 THBDP07204 575 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZNF865P0CJ78 1059 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 SSTR4P31391 388 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 SEPHS1P49903 392 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 SCNN1BP51168 640 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 TNK2Q07912 1038 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 CYP4F3Q08477 520 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 ACBD5Q5T8D3 534 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 E4F1Q66K89 784 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 IQCEQ6IPM2 695 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 DENND5AQ6IQ26 1287 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZCCHC8Q6NZY4 707 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 KCNT2Q6UVM3 1135 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 NECAB2Q7Z6G3 386 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 MTDHQ86UE4 582 aaKnown RBP4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 ANKLE2Q86XL3 938 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 KIF18BQ86Y91 864 aa4.35□□□□□ -1.71
TRAPPC11-205ENST00000506426 PPIL6Q8IXY8 311 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms