RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 HAUS7Q99871 368 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 C1QTNF1Q9BXJ1 281 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 KATNBL1Q9H079 304 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 TRPV6Q9H1D0 765 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 SLC38A10Q9HBR0 1119 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 RNF146Q9NTX7 359 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 NYAP2Q9P242 653 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 FBXO40Q9UH90 709 aa8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 GREB1LQ9C091 1923 aaPredicted RBP8.24□□□□□ -1.09
NPIPB3-203ENST00000504841 DNAH12Q6ZR08 3092 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 ATP2A1O14983 1001 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 DYNC1LI2O43237 492 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 GTPBP6O43824 516 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 ZEB2O60315 1214 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 HMMRO75330 724 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 CABYRO75952 493 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 CA3P07451 260 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 CYP2C9P11712 490 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 BMP1P13497 986 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 SMPD1P17405 629 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 GSE1Q14687 1217 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 AAK1Q2M2I8 961 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 KRT40Q6A162 431 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 ZSCAN25Q6NSZ9 544 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 CEP95Q96GE4 821 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 ACAD9Q9H845 621 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 A1CFQ9NQ94 594 aaKnown RBP8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 PDGFCQ9NRA1 345 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 FEM1BQ9UK73 627 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 COG6Q9Y2V7 657 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 HCN4Q9Y3Q4 1203 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 GRIN2DO15399 1336 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 LRRC37A2A6NM11 1700 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 PRUNE2Q8WUY3 3088 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 MYH7P12883 1935 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 MYH4Q9Y623 1939 aa8.23□□□□□ -1.09
NPIPB3-203ENST00000504841 SPTBN5Q9NRC6 3674 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 SOWAHBA6NEL2 793 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 BMP3P12645 472 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 ALAS1P13196 640 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 ATP5JP18859 108 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 TDO2P48775 406 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 CLCN6P51797 869 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 OAZ1P54368 228 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 SNAP25P60880 206 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 TTLL4Q14679 1199 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 FAM47CQ5HY64 1035 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 TMEM67Q5HYA8 995 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 TMEM63BQ5T3F8 832 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 SLFN13Q68D06 897 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 RPUSD2Q8IZ73 545 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 ZNF444Q8N0Y2 327 aaPredicted RBP8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 FAM133AQ8N9E0 248 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 SLC43A3Q8NBI5 491 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 PPP1R13LQ8WUF5 828 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 ARNTL2Q8WYA1 636 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 AGBL1Q96MI9 1066 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 EPHX3Q9H6B9 360 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 TRMT13Q9NUP7 481 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
NPIPB3-203ENST00000504841 LAMA2P24043 3122 aaKnown RBP8.21□□□□□ -1.09
NPIPB3-203ENST00000504841 IGKV6D-41A0A0C4DH26 115 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 FAM86C2PA6NEL3 165 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 EPOPA6NHQ4 379 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 ASB14A6NK59 587 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 GSG1L2A8MUP6 293 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 CCER2I3L3R5 266 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 ERC2O15083 957 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 RAB11FIP3O75154 756 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 TTLL1O95922 423 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 APPP05067 770 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 MYL3P08590 195 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 TSPY3P0CV98 308 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 TSPY8P0CW00 308 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 STAT2P52630 851 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 NKX3-2P78367 333 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 HNRNPUQ00839 825 aaKnown RBP eCLIP8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 NSMFQ6X4W1 530 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 KIAA1211Q6ZU35 1233 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 SIRT2Q8IXJ6 389 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 GMCL1P1Q8NEA9 526 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 TRERF1Q96PN7 1200 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 PURBQ96QR8 312 aaKnown RBP8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 STRBPQ96SI9 672 aaKnown RBP8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 LRFN3Q9BTN0 628 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 ALDH8A1Q9H2A2 487 aaPredicted RBP8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 EPB41L4AQ9HCS5 686 aaPredicted RBP8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 MTCH2Q9Y6C9 303 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 TNKSO95271 1327 aa8.21□□□□□ -1.1
NPIPB3-203ENST00000504841 GPAA1O43292 621 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 SMARCA5O60264 1052 aaPredicted RBP8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 ARHGEF15O94989 841 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 ACTN1P12814 892 aa8.2□□□□□ -1.1
NPIPB3-203ENST00000504841 SLC1A4P43007 532 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms